RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ITGAXP20702 1163 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 MMP11P24347 488 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 ITGA3P26006 1051 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 AOAHP28039 575 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 CCNFP41002 786 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 GRIA1P42261 906 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 NPY2RP49146 381 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 SOX8P57073 446 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 SESN2P58004 480 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 NAA25Q14CX7 972 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 RPS6KA1Q15418 735 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 EIF2S3LQ2VIR3 472 aaKnown RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 PLEKHN1Q494U1 663 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 PRR30Q53SZ7 412 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 OTOAQ7RTW8 1153 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 OVCH1Q7RTY7 1134 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 PPP1R32Q7Z5V6 425 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 SDCCAG8Q86SQ7 713 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 TAX1BP1Q86VP1 789 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 TMEM139Q8IV31 216 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 VRK3Q8IV63 474 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 FAM20CQ8IXL6 584 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 KRT222Q8N1A0 295 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 MPP5Q8N3R9 675 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 LINC01555Q8NAE3 123 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 PRR7Q8TB68 274 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 MAIP1Q8WWC4 291 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 ZUFSPQ96AP4 578 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 IL17FQ96PD4 163 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 SELENOSQ9BQE4 189 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 IL22Q9GZX6 179 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 ZNF552Q9H707 407 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 WDR54Q9H977 334 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 MRM3Q9HC36 420 aaKnown RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 CUTCQ9NTM9 273 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 CDC23Q9UJX2 597 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 NXT1Q9UKK6 140 aaKnown RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 TTC7AQ9ULT0 858 aaPredicted RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 GUCA1BQ9UMX6 200 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 KLHL20Q9Y2M5 609 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 COPG1Q9Y678 874 aaKnown RBP10.44□□□□□ -0.74
PVT1-208ENST00000519481 RELNP78509 3460 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 NOTCH2Q04721 2471 aa10.44□□□□□ -0.74
PVT1-208ENST00000519481 A0A0U1RQJ8 604 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 TARM1B6A8C7 271 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 SRPX2O60687 465 aaPredicted RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 CTSBP07858 339 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 ETS1P14921 441 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 GLRBP48167 497 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 BASP1P80723 227 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 MRPL49Q13405 166 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 SEMA3AQ14563 771 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 RBBP7Q16576 425 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 CCNG2Q16589 344 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 MRNIPQ6NTE8 343 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 LDB1Q86U70 411 aaPredicted RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 CISD2Q8N5K1 135 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 LKAAEAR1Q8TD35 194 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 COG1Q8WTW3 980 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 SNRNP40Q96DI7 357 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 EIF2B3Q9NR50 452 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 CHRAC1Q9NRG0 131 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 AGPAT4Q9NRZ5 378 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 CIDEBQ9UHD4 219 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 FBXL4Q9UKA2 621 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 DRG1Q9Y295 367 aaKnown RBP10.43□□□□□ -0.74
PVT1-208ENST00000519481 SHANK1Q9Y566 2161 aa10.43□□□□□ -0.74
PVT1-208ENST00000519481 ANKRD12Q6UB98 2062 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 H3BMM5 538 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 CNOT3O75175 753 aaKnown RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 SEMA7AO75326 666 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 C1orf105O95561 183 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 ONECUT2O95948 504 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 UMODP07911 640 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 ERVK-10P10266 1014 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 RPS3P23396 243 aaKnown RBP eCLIP10.42□□□□□ -0.74
PVT1-208ENST00000519481 CDC25BP30305 580 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 RPL22P35268 128 aaKnown RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 GRIA3P42263 894 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 EIF3BP55884 814 aaKnown RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 SARNPP82979 210 aaKnown RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 OCA2Q04671 838 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 NR6A1Q15406 480 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 NKG7Q16617 165 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 TUBB8Q3ZCM7 444 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 RNF187Q5TA31 235 aaPredicted RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 AGAP7PQ5VUJ5 663 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 PRAMEF13Q5VWM6 474 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 FCRL6Q6DN72 434 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 PRUNE1Q86TP1 453 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 LMNTD1Q8N9Z9 388 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 C19orf60Q96EN9 201 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 AGAP4Q96P64 663 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 WDR77Q9BQA1 342 aaPredicted RBP10.42□□□□□ -0.74
PVT1-208ENST00000519481 MENTQ9BUN1 341 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 SLC26A1Q9H2B4 701 aa10.42□□□□□ -0.74
PVT1-208ENST00000519481 EPS8L2Q9H6S3 715 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms