RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RNF215Q9Y6U7 377 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 U3KQ87 197 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 C4AP0C0L4 1744 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 C4BP0C0L5 1744 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CRB1P82279 1406 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RIC1Q4ADV7 1423 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A087X0B3 334 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A0X1KG70 313 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATP6AP2A0A1C7CYW4 349 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DENND3A2RUS2 1198 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PMS2P1A4D2B8 440 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MTMR11A4FU01 709 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCDC154A6NI56 674 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MYMKA6NI61 221 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUDT19A8MXV4 375 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCP10L2B9ZVM9 353 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MCIDASD6RGH6 385 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 E5RI56 91 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 E7ENX8 843 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CASC3O15234 703 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC31A2O15432 143 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUPL2O15504 423 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TBX1O43435 398 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MITFO75030 526 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SNNO75324 88 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP7B1O75881 506 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CNTN5O94779 1100 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 RASAL1O95294 804 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TDP2O95551 362 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 RAB3DO95716 219 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANGPTL1O95841 491 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 AHSGP02765 367 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 FCER2P06734 321 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TPOP07202 933 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADRB1P08588 477 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CLEC2LP0C7M8 214 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP2C8P10632 490 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 JUPP14923 745 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CTPS1P17812 591 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 BGNP21810 368 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNA5P22460 613 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 IVDP26440 423 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ACSL1P33121 698 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ADRA1BP35368 520 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARL4AP40617 200 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PPP3CCP48454 512 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNC1P48547 511 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MASP1P48740 699 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PPM1FP49593 454 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 NT5C2P49902 561 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SERPINB9P50453 376 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 NR0B1P51843 470 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PER3P56645 1201 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ABCE1P61221 599 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PSMC6P62333 389 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SKP1P63208 163 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAT1AQ00266 395 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PURAQ00577 322 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 HSF2Q03933 536 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 FGL1Q08830 312 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPIRE1Q08AE8 756 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTP4A2Q12974 167 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC13A2Q13183 592 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 IL18R1Q13478 541 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 GK3PQ14409 553 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRAM2Q15035 370 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTPRRQ15256 657 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 QPRTQ15274 297 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 LLGL1Q15334 1064 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCDC142Q17RM4 750 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 WSCD2Q2TBF2 565 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 AP5B1Q2VPB7 878 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR33Q49SQ1 333 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 KLHL26Q53HC5 615 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PABPC1L2AQ5JQF8 200 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 COLEC12Q5KU26 742 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SAMD4BQ5PRF9 694 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 LDLRAP1Q5SW96 308 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ODR4Q5SWX8 454 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDSS1Q5T2R2 415 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DDI2Q5TDH0 399 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 IZUMO3Q5VZ72 239 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP4F22Q6NT55 531 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MZT2BQ6NZ67 158 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP2R1Q6VVX0 501 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRIM72Q6ZMU5 477 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANKS3Q6ZW76 656 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ENOSF1Q7L5Y1 443 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF571Q7Z3V5 609 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 P2RY8Q86VZ1 359 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 KRT73Q86Y46 540 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CPNE8Q86YQ8 564 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC22A9Q8IVM8 553 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SP8Q8IXZ3 490 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DSELQ8IZU8 1212 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PYROXD2Q8N2H3 581 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 STPG2Q8N412 459 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATPAF2Q8N5M1 289 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 UBR7Q8N806 425 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 AVL9Q8NBF6 648 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms