RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	GRIA3	P42263	894 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	OR1D4	P47884	311 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	CARS	P49589	748 aa	Known RBP	15.08	■□□□□ 0
LMNA-223	ENST00000515459	KCNK10	P57789	538 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	ARG2	P78540	354 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	POU6F1	Q14863	301 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	FAM214A	Q32MH5	1076 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	DNAJC21	Q5F1R6	531 aa	Known RBP	15.08	■□□□□ 0
LMNA-223	ENST00000515459	ZNF324B	Q6AW86	544 aa	Predicted RBP	15.08	■□□□□ 0
LMNA-223	ENST00000515459	GDF7	Q7Z4P5	450 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	KLHDC8B	Q8IXV7	354 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	LINC01555	Q8NAE3	123 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	KRT35	Q92764	455 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	CRB3	Q9BUF7	120 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	EFR3B	Q9Y2G0	817 aa		15.08	■□□□□ 0
LMNA-223	ENST00000515459	DYTN	A2CJ06	578 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459		F8W8V4	182 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	CBFA2T2	O43439	604 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	S1PR4	O95977	384 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	RPN2	P04844	631 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	ACPP	P15309	386 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	MSN	P26038	577 aa	Known RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	PTGER4	P35408	488 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	TDGF1P3	P51864	188 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	CSE1L	P55060	971 aa	Known RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	SF1	Q15637	639 aa	Known RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	INA	Q16352	499 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	KCTD11	Q693B1	232 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	C11orf63	Q6NUN7	778 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	FIGLA	Q6QHK4	219 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	NLRP9	Q7RTR0	991 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	METTL27	Q8N6F8	245 aa	Predicted RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	ITLN2	Q8WWU7	325 aa	Predicted RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	NR4A3	Q92570	626 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	FAM118B	Q9BPY3	351 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	SELENOS	Q9BQE4	189 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	MENT	Q9BUN1	341 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	ZNF160	Q9HCG1	818 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	ENAM	Q9NRM1	1142 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	IMPACT	Q9P2X3	320 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	SUCO	Q9UBS9	1254 aa	Known RBP	15.07	■□□□□ 0
LMNA-223	ENST00000515459	MAU2	Q9Y6X3	613 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	PDZD2	O15018	2839 aa		15.07	■□□□□ 0
LMNA-223	ENST00000515459	FBN2	P35556	2912 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	TRAV17	A0A0B4J275	112 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	FITM1	A5D6W6	292 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	MAP2K7	O14733	419 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	PJA2	O43164	708 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	USP1	O94782	785 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	FOXN2	P32314	431 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	MAGEA1	P43355	309 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	TNFSF10	P50591	281 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	OCA2	Q04671	838 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	KLC1	Q07866	573 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	GFRAL	Q6UXV0	394 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	ARHGEF18	Q6ZSZ5	1173 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	TAX1BP1	Q86VP1	789 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	KBTBD2	Q8IY47	623 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	SLC22A15	Q8IZD6	547 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	C2orf73	Q8N5S3	287 aa	Predicted RBP	15.06	■□□□□ 0
LMNA-223	ENST00000515459	LMNTD1	Q8N9Z9	388 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	OR2L8	Q8NGY9	312 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	STT3B	Q8TCJ2	826 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	ZNF285	Q96NJ3	590 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	TAAR6	Q96RI8	345 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	MESP1	Q9BRJ9	268 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	OSBPL8	Q9BZF1	889 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	LRRC40	Q9H9A6	602 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	ZNF304	Q9HCX3	659 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	CHST11	Q9NPF2	352 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	C2CD3	Q4AC94	2353 aa		15.06	■□□□□ 0
LMNA-223	ENST00000515459	TRGV8	A0A0C4DH27	118 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	MROH6	A6NGR9	719 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	OR51F1	A6NGY5	319 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	SRPX2	O60687	465 aa	Predicted RBP	15.05	■□□□□ -0
LMNA-223	ENST00000515459	ZNF189	O75820	626 aa	Predicted RBP	15.05	■□□□□ -0
LMNA-223	ENST00000515459	FKBP9	O95302	570 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	PSMA3	P25788	255 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	HSPA14	Q0VDF9	509 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	PARP6	Q2NL67	630 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	WASHC2D	Q5SRD0	308 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	MTFR2	Q6P444	385 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	TMEM207	Q6UWW9	146 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	BNC2	Q6ZN30	1099 aa	Predicted RBP	15.05	■□□□□ -0
LMNA-223	ENST00000515459	MRGPRG	Q86SM5	289 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	VSTM4	Q8IW00	320 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	DCUN1D3	Q8IWE4	304 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	ZNF808	Q8N4W9	903 aa	Predicted RBP	15.05	■□□□□ -0
LMNA-223	ENST00000515459	CFAP61	Q8NHU2	1237 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	HAS2	Q92819	552 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	ZUFSP	Q96AP4	578 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	MIEF2	Q96C03	454 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	C8orf44	Q96CB5	159 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	CCDC120	Q96HB5	630 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	LURAP1	Q96LR2	239 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	IL17F	Q96PD4	163 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	TTC1	Q99614	292 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	PTGFRN	Q9P2B2	879 aa		15.05	■□□□□ -0
LMNA-223	ENST00000515459	ZNF282	Q9UDV7	671 aa	Predicted RBP	15.05	■□□□□ -0
LMNA-223	ENST00000515459	CIDEB	Q9UHD4	219 aa		15.05	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms