RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 YES1P07947 543 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PPM1AP35813 382 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 HNF4AP41235 474 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 MAN2A2P49641 1150 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RAB13P51153 203 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 MAPK10P53779 464 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PRKAA2P54646 552 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RIN1Q13671 783 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 KLHL26Q53HC5 615 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SAPCD1Q5SSQ6 148 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CERCAMQ5T4B2 595 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RTL4Q6ZR62 310 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 HTR3DQ70Z44 454 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SSX9Q7RTT3 188 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 C10orf107Q8IVU9 208 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SCML4Q8N228 414 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 MFSD3Q96ES6 412 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CPNE1Q99829 537 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 XKR8Q9H6D3 395 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SNX15Q9NRS6 342 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 OR12D3Q9UGF7 316 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ZFR2Q9UPR6 939 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SESN1Q9Y6P5 492 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 A8MV72 311 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 M0QZQ0 153 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TM7SF2O76062 418 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SORBS2O94875 1100 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 H6PDO95479 791 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PFKLP17858 780 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 NELFEP18615 380 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TCN1P20061 433 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CYP2A7P20853 494 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 BRCC3P46736 316 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 LEPRP48357 1165 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 LIMK2P53671 638 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ATP12AP54707 1039 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CDH15P55291 814 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 HUNKP57058 714 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 UBE2IP63279 158 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 IFITM3Q01628 133 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC13A2Q13183 592 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ADAM15Q13444 863 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TYSND1Q2T9J0 566 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PRPF38BQ5VTL8 546 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 KRT80Q6KB66 452 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TMPRSS6Q8IU80 811 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CRLF3Q8IUI8 442 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ARHGAP12Q8IWW6 846 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 EFHBQ8N7U6 833 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TTC29Q8NA56 475 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PDPRQ8NCN5 879 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RBM15BQ8NDT2 890 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SOCS4Q8WXH5 440 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ATOH1Q92858 354 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF669Q96BR6 464 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TOX2Q96NM4 488 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SSX3Q99909 188 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 GTPBP2Q9BX10 602 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 UPF3AQ9H1J1 476 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 WDCPQ9H6R7 721 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 LRRC40Q9H9A6 602 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 COPG2Q9UBF2 871 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 GRHPRQ9UBQ7 328 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 DCDC2Q9UHG0 476 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 H3BM21 787 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SCGB1D2O95969 90 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PGK1P00558 417 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC1A6P48664 564 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 HNRNPKP61978 463 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ARHGAP8P85298 464 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 IRF9Q00978 393 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CREB5Q02930 508 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RARS2Q5T160 578 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ANKS6Q68DC2 871 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 FSTL4Q6MZW2 842 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RNF111Q6ZNA4 994 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF767PQ75MW2 155 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 KIF18BQ86Y91 864 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 TIGD4Q8IY51 512 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 KDM1BQ8NB78 822 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 OR6F1Q8NGZ6 308 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 OR8K5Q8NH50 307 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 MOCOSQ96EN8 888 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 SH3YL1Q96HL8 342 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ACBD6Q9BR61 282 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF251Q9BRH9 671 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 WWP1Q9H0M0 922 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CAB39LQ9H9S4 337 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF556Q9HAH1 456 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 RRAGCQ9HB90 399 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CHRAC1Q9NRG0 131 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 DNAJC28Q9NX36 388 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 UXTQ9UBK9 157 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 GAB2Q9UQC2 676 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 G3V2L1 256 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 H7C0S8 307 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms