RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KCND3Q9UK17 655 aa12.79□□□□□ -0.36
RNF4-215ENST00000511843 VPS9D1Q9Y2B5 631 aa12.79□□□□□ -0.36
RNF4-215ENST00000511843 PCDHGA6Q9Y5G7 932 aa12.79□□□□□ -0.36
RNF4-215ENST00000511843 BAHCC1Q9P281 2608 aa12.79□□□□□ -0.36
RNF4-215ENST00000511843 GCN1Q92616 2671 aaKnown RBP12.79□□□□□ -0.36
RNF4-215ENST00000511843 NUP210LQ5VU65 1888 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 A0A1W2PPV9 198 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 C21orf140B9A014 251 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 TP73O15350 636 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 CAPN1P07384 714 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 CBSLP0DN79 551 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 MCM3P25205 808 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 GABRB3P28472 473 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 ATP5DP30049 168 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 CBSP35520 551 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 PAFAH1B1P43034 410 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 FOXL2P58012 376 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 RPS15P62841 145 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 C2orf54Q08AI8 447 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 KCNAB2Q13303 367 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 TSTA3Q13630 321 aaPredicted RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 HIBCHQ6NVY1 386 aaPredicted RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 TRMT10BQ6PF06 316 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 FIGLAQ6QHK4 219 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 SUSD1Q6UWL2 747 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 PIWIL4Q7Z3Z4 852 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 PCGF5Q86SE9 256 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 GPR135Q8IZ08 494 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 ENDOVQ8N8Q3 282 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 C2CD4AQ8NCU7 369 aaPredicted RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 CALML6Q8TD86 181 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 AARSD1Q9BTE6 412 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 ACAT2Q9BWD1 397 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 FARSAQ9Y285 508 aaKnown RBP12.78□□□□□ -0.36
RNF4-215ENST00000511843 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
RNF4-215ENST00000511843 ZNF462Q96JM2 2506 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 EFCAB8A8MWE9 144 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 B8ZZF3 427 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 CCDC188H7C350 402 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 ZSCAN9O15535 394 aaPredicted RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 DNAJB5O75953 348 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SEC31AO94979 1220 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 NR1D1P20393 614 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 CCNFP41002 786 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 TIAL1Q01085 375 aaKnown RBP eCLIP12.77□□□□□ -0.37
RNF4-215ENST00000511843 CHAF1BQ13112 559 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 FASTKD3Q14CZ7 662 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 MORF4L2Q15014 288 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 HIF1AQ16665 826 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 COLEC12Q5KU26 742 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SPANXN3Q5MJ09 141 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 ZNF385CQ66K41 422 aaPredicted RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 CPZQ66K79 652 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SYDE1Q6ZW31 735 aaPredicted RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 MCATQ8IVS2 390 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 DTWD1Q8N5C7 304 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 OR2A1Q8NGT9 310 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 OR9A1PQ8NGU1 263 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 CERS2Q96G23 380 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SNF8Q96H20 258 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 PKP4Q99569 1192 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 GPR87Q9BY21 358 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 PPANQ9NQ55 473 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 ZNF71Q9NQZ8 489 aaPredicted RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 EURLQ9NYK6 297 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
RNF4-215ENST00000511843 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 POLHQ9Y253 713 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 MAN2B2Q9Y2E5 1009 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 SNX24Q9Y343 169 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 DHRS7Q9Y394 339 aa12.77□□□□□ -0.37
RNF4-215ENST00000511843 K7EM74 188 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 MYO1CO00159 1063 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 CTSVO60911 334 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
RNF4-215ENST00000511843 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
RNF4-215ENST00000511843 CDKN2DP55273 166 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 CYP2A13Q16696 494 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms