RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 ZIM3Q96PE6 472 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 OR2A14Q96R47 310 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 ACAT2Q9BWD1 397 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 STRADBQ9C0K7 418 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 ATG10Q9H0Y0 220 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 PPCSQ9HAB8 311 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 NMRAL1Q9HBL8 299 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 ZNF358Q9NW07 568 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 SOHLH2Q9NX45 425 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 EURLQ9NYK6 297 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 CACNA1AO00555 2505 aa10.06□□□□□ -0.8
NR1I3-227ENST00000510951 IGHV5-51A0A0C4DH38 117 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 A0A1W2PPV9 198 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 UBXN8O00124 270 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 KLHL2O95198 593 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 MT-ND3P03897 115 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 ENO2P09104 434 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 PYGBP11216 843 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 ST6GAL1P15907 406 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 PRDX3P30048 256 aaKnown RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 RPA3P35244 121 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 KIR2DS3Q14952 304 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 TGFBIQ15582 683 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 FAM83EQ2M2I3 478 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 C18orf21Q32NC0 220 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 THEMIS2Q5TEJ8 643 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 KLC3Q6P597 504 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 AGTRAPQ6RW13 159 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 PRSS42Q7Z5A4 293 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CCDC91Q7Z6B0 441 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 FAM129CQ86XR2 697 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 GPSM1Q86YR5 675 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 FLVCR1-AS1Q8TAF5 88 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 SMPDL3AQ92484 453 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CCDC138Q96M89 665 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 TSNARE1Q96NA8 513 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CD180Q99467 661 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 MIPEPQ99797 713 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 RAB33BQ9H082 229 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CCDC177Q9NQR7 707 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CD274Q9NZQ7 290 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 EPHA6Q9UF33 1036 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 PISDQ9UG56 409 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 TAC3Q9UHF0 121 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 NOVA2Q9UNW9 492 aaKnown RBP10.05□□□□□ -0.8
NR1I3-227ENST00000510951 SATB2Q9UPW6 733 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 LOXL2Q9Y4K0 774 aa10.05□□□□□ -0.8
NR1I3-227ENST00000510951 CCDC187A0A096LP49 1063 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 A0A0J9YY10 115 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SLC9B1P1A6NJY1 282 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ZNF839A8K0R7 811 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 EFCAB7A8K855 629 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 E7ENX8 843 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 TK2O00142 265 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 PRAMEF10O60809 474 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 KERAO60938 352 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 S100BP04271 92 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ANXA5P08758 320 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ITIH1P19827 911 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 MAGP20916 626 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 OAS2P29728 719 aaKnown RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 CSTF2P33240 577 aaKnown RBP eCLIP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SLC26A3P40879 764 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ARL4DP49703 201 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 AP1S2P56377 157 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 YBX1P67809 324 aaKnown RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SH3BP2P78314 561 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 TAP2Q03519 686 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 NAE1Q13564 534 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 TRA2AQ13595 282 aaKnown RBP eCLIP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 KCNAB1Q14722 419 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ARHGAP19Q14CB8 494 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SF1Q15637 639 aaKnown RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SLC5A12Q1EHB4 618 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 TECRLQ5HYJ1 363 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 TIFABQ6ZNK6 161 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 RAB11FIP2Q7L804 512 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ARHGAP22Q7Z5H3 698 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 CLEC14AQ86T13 490 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 LRRC56Q8IYG6 542 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 C4orf33Q8N1A6 199 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 RIBC1Q8N443 379 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 FBXO39Q8N4B4 442 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 C19orf47Q8N9M1 422 aaKnown RBP10.04□□□□□ -0.8
NR1I3-227ENST00000510951 HMGCLL1Q8TB92 370 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
NR1I3-227ENST00000510951 SLC22A18Q96BI1 424 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms