RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ARHGEF28Q8N1W1 1705 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 WDTC1Q8N5D0 677 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 COMMD1Q8N668 190 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 LEMD2Q8NC56 503 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KREMEN2Q8NCW0 462 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RBM15BQ8NDT2 890 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 C19orf18Q8NEA5 215 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 OR52E1Q8NGJ3 308 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ST7LQ8TDW4 575 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RASSF5Q8WWW0 418 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ING5Q8WYH8 240 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PROX1Q92786 737 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 APBB2Q92870 758 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SPSB4Q96A44 273 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RGMAQ96B86 450 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 HAUS1Q96CS2 278 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MTFMTQ96DP5 389 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 DUS3LQ96G46 650 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CYP2S1Q96SQ9 504 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SYT17Q9BSW7 474 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SPATA16Q9BXB7 569 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 IDI2Q9BXS1 227 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ACE2Q9BYF1 805 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MFFQ9GZY8 342 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SLC6A15Q9H2J7 730 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MMP27Q9H306 513 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CATSPERBQ9H7T0 1116 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FOLH1BQ9HBA9 442 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 LTB4R2Q9NPC1 389 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 UFSP2Q9NUQ7 469 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 HCFC1R1Q9NWW0 138 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CMTM6Q9NX76 183 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 NKIRAS1Q9NYS0 192 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 TRPC4Q9UBN4 977 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 WNT16Q9UBV4 365 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 Q9UFV3 132 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KCND3Q9UK17 655 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MAN1B1Q9UKM7 699 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PCDHA12Q9UN75 941 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FAF1Q9UNN5 650 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KCNK7Q9Y2U2 307 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MAP3K15Q6ZN16 1313 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CLTCQ00610 1675 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GLI2P10070 1586 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CDC42BPGQ6DT37 1551 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0U1RQJ8 604 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 C2orf92A0A1B0GVN3 265 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 FAM149AA5PLN7 773 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 BTBD17A6NE02 478 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 HMX3A6NHT5 357 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 SUPT3HB4E1H0 165 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 NR5A2O00482 541 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CLDN4O14493 209 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ITGB1BP1O14713 200 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 INPPL1O15357 1258 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 INSIG1O15503 277 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PRPF4O43172 522 aaKnown RBP eCLIP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 COCHO43405 550 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 KCNQ3O43525 872 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TBX19O60806 448 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 MT-ATP6P00846 226 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CALB1P05937 261 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 SERPINA6P08185 405 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ANXA5P08758 320 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ABHD2P08910 425 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 HBQ1P09105 142 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CALCBP10092 127 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 UROSP10746 265 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 F3P13726 295 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TCF4P15884 667 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 EPORP19235 508 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PRPS1L1P21108 318 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TUBG1P23258 451 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CMA1P23946 247 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 G0S2P27469 103 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 OXTRP30559 389 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 SERPINB1P30740 379 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CDH5P33151 784 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 HTR7P34969 479 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CD79BP40259 229 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 STAT6P42226 847 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CDKN2CP42773 168 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GSSP48637 474 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CEBPDP49716 269 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 RIDAP52758 137 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PDE1AP54750 535 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 EPHA5P54756 1037 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PRPS1P60891 318 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 OCA2Q04671 838 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ILF2Q12905 390 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 MYO1EQ12965 1108 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 DMP1Q13316 513 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 SNTA1Q13424 505 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GPR68Q15743 365 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CEBPEQ15744 281 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CAMK4Q16566 473 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 NADK2Q4G0N4 442 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms