RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RWDD2AQ9UIY3 292 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 UBE2CO00762 179 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MFAP3LO75121 409 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 OCM2P0CE71 109 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MAPTP10636 758 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 APEX1P27695 318 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 BSGP35613 385 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MAP3K8P41279 467 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CLCN5P51795 746 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GPLD1P80108 840 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 IL9RQ01113 521 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PUM1Q14671 1186 aaKnown RBP eCLIP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 C9orf50Q5SZB4 431 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 LIN9Q5TKA1 542 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF658Q5TYW1 1059 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PYHIN1Q6K0P9 492 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 KCTD1Q719H9 257 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 KATNAL2Q8IYT4 538 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GPC2Q8N158 579 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF276Q8N554 614 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF611Q8N823 705 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 REPS2Q8NFH8 660 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 DGCR14Q96DF8 476 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 WDR92Q96MX6 357 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 COPS8Q99627 209 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TINAGL1Q9GZM7 467 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 LRRN3Q9H3W5 708 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SERTAD3Q9UJW9 196 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 MAN1B1Q9UKM7 699 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 RNF150Q9ULK6 438 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 BARX2Q9UMQ3 279 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 COPS3Q9UNS2 423 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GPR25O00155 361 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TNFRSF10AO00220 468 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 LIN7AO14910 233 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 AURKAO14965 403 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 B4GAT1O43505 415 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GRAP2O75791 330 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PRKACAP17612 351 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 EN2P19622 333 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ITGB8P26012 769 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CYP4A11Q02928 519 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 STX4Q12846 297 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GAB1Q13480 694 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 HFEQ30201 348 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM196Q5HYL7 178 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 STXBP5Q5T5C0 1151 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 FAM46CQ5VWP2 391 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GRAMD4Q6IC98 578 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 RGS7BPQ6MZT1 257 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 OTOP1Q7RTM1 612 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CLEC10AQ8IUN9 316 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ERI1Q8IV48 349 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GPR65Q8IYL9 337 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 RABGGTAQ92696 567 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PAGE5Q96GU1 130 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 AMNQ9BXJ7 453 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TPSD1Q9BZJ3 242 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 BHLHE41Q9C0J9 482 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GSTO2Q9H4Y5 243 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 DCLRE1BQ9H816 532 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 METTL7AQ9H8H3 244 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ABCB9Q9NP78 766 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 XPNPEP3Q9NQH7 507 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CCDC162PA2VCL2 907 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 WASH4PA8MWX3 477 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 DCLK1O15075 740 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GAAP10253 952 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 HNF1AP20823 631 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 UQCRFS1P47985 274 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ARFIP1P53367 373 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 NKX3-2P78367 333 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ABATP80404 500 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 ACY1Q03154 408 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CHIT1Q13231 466 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TFDP1Q14186 410 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CTTNQ14247 550 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 AAK1Q2M2I8 961 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 DNAL1Q4LDG9 190 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SPOPLQ6IQ16 392 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 DENND1BQ6P3S1 775 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 Q71RC1 249 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TRMT1LQ7Z2T5 733 aaKnown RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PPP1R3BQ86XI6 285 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CRLF3Q8IUI8 442 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 FUNDC1Q8IVP5 155 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 PHYHIPQ92561 330 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SGCDQ92629 289 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 FAM46BQ96A09 425 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TRIM43Q96BQ3 446 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-209ENST00000508871 SENP8Q96LD8 212 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 CCDC42Q96M95 316 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TIPINQ9BVW5 301 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 TEKT3Q9BXF9 490 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 GPR61Q9BZJ8 451 aa3.83□□□□□ -1.8
NEDD4-209ENST00000508871 HAO2Q9NYQ3 351 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms