RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 IRAK1BP1Q5VVH5 260 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 FIGLAQ6QHK4 219 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 IGFL3Q6UXB1 125 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 NAPRTQ6XQN6 538 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 GAS2L3Q86XJ1 694 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 LMNTD1Q8N9Z9 388 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 SKA2Q8WVK7 121 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 ZNF778Q96MU6 729 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 P2RY12Q9H244 342 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 SLC26A1Q9H2B4 701 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 CUEDC1Q9NWM3 386 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 SPATA7Q9P0W8 599 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 PLAGL1Q9UM63 463 aa13.07□□□□□ -0.32
CCHCR1-227ENST00000508852 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 NUP210LQ5VU65 1888 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 A0A0U1RQJ8 604 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 A6NL46 340 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 AGPSO00116 658 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 DSCR3O14972 297 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 FGGP02679 453 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 ETS1P14921 441 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 OVCH1Q7RTY7 1134 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 IQCKQ8N0W5 287 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 NAP1L3Q99457 506 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 MENTQ9BUN1 341 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 P4HTMQ9NXG6 502 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 TTC7AQ9ULT0 858 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 SOX13Q9UN79 622 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 PCM1Q15154 2024 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 CCDC88CQ9P219 2028 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 FER1L5A0AVI2 2057 aa13.06□□□□□ -0.32
CCHCR1-227ENST00000508852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 FITM1A5D6W6 292 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 IQCF5A8MTL0 148 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 VAPBO95292 243 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 C1orf105O95561 183 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 ZSCAN5DPP0CG00 497 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 OGNP20774 298 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 MMP11P24347 488 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 EMP3P54852 163 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 EIF3BP55884 814 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 ARHGAP19Q14CB8 494 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 INPP5JQ15735 1006 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 TYSND1Q2T9J0 566 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 TTLL9Q3SXZ7 439 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 SLC6A19Q695T7 634 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 KIAA0930Q6ICG6 404 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 PRMT9Q6P2P2 845 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 TTLL10Q6ZVT0 673 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 VRK3Q8IV63 474 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 KRT222Q8N1A0 295 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 GABPB2Q8TAK5 448 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 ZNF285Q96NJ3 590 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 NRTNQ99748 197 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 LZTFL1Q9NQ48 299 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 SEMA3GQ9NS98 782 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 CUTCQ9NTM9 273 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 SAMD15Q9P1V8 674 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 KLHL42Q9P2K6 505 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 B3GNT3Q9Y2A9 372 aa13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 PRRC2CQ9Y520 2896 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-227ENST00000508852 COL12A1Q99715 3063 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 E5RI56 91 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 PCDH17O14917 1159 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.321e-8■■□□□ 11.6
CCHCR1-227ENST00000508852 PRICKLE3O43900 615 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 CEP104O60308 925 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 VPS26AO75436 327 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 AGFG2O95081 481 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 CCNDBP1O95273 360 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 DDAH2O95865 285 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 MLNP12872 115 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 NMBRP28336 390 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 CMPK1P30085 196 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 GCGRP47871 477 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 GRB7Q14451 532 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 ANKRD20A4Q4UJ75 823 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 LDB1Q86U70 411 aaPredicted RBP13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 PSMG3-AS1Q96PY0 264 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms