RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 BFARQ9NZS9 450 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 LUZP4Q9P127 313 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 GPN3Q9UHW5 284 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 NFS1Q9Y697 457 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 DOPEY1Q5JWR5 2465 aa12.49□□□□□ -0.41
HMGCS1-205ENST00000508319 A0A1B0GX78 115 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 MASP2O00187 686 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 VPS4BO75351 444 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 CCDC175P0C221 793 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 GNLYP22749 145 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 MCM3P25205 808 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 PSMB5P28074 263 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 NPY2RP49146 381 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 TYSND1Q2T9J0 566 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 CCSMST1Q4G0I0 132 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 LRRC8BQ6P9F7 803 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 CES3Q6UWW8 571 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 TTLL10Q6ZVT0 673 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 COX15Q7KZN9 410 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 MCATQ8IVS2 390 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 LPGAT1Q92604 370 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 DLG3Q92796 817 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 PNPLA2Q96AD5 504 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 FER1L6-AS2Q96M78 137 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF285Q96NJ3 590 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 PSMG3-AS1Q96PY0 264 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 MFRPQ9BY79 579 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC39A10Q9ULF5 831 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 VPS4AQ9UN37 437 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
HMGCS1-205ENST00000508319 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GOLGA8KD6RF30 607 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 AP3B1O00203 1094 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 KPNA5O15131 536 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 NRP2O60462 931 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 CTSVO60911 334 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 NIPSNAP2O75323 286 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 NDUFS3O75489 264 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 VAPBO95292 243 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 C1orf105O95561 183 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 ONECUT2O95948 504 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 CD63P08962 238 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GP1BBP13224 206 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 CXCR5P32302 372 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GRIA3P42263 894 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 ARSFP54793 590 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 CDK16Q00536 496 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GBX1Q14549 363 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 MYBPC3Q14896 1274 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 SF1Q15637 639 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 INPP5JQ15735 1006 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GALNT16Q8N428 558 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 OTUD6BQ8N6M0 293 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 PRELID2Q8N945 189 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 CLEC1AQ8NC01 280 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 HMGCLL1Q8TB92 370 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 DENND1AQ8TEH3 1009 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 MAIP1Q8WWC4 291 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 FKBP10Q96AY3 582 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 RAD51AP1Q96B01 352 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 PTERQ96BW5 349 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 SPSB2Q99619 263 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 INTS7Q9NVH2 962 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 C5AR2Q9P296 337 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 SOX13Q9UN79 622 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 KLK4Q9Y5K2 254 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 HEATR5BQ9P2D3 2071 aa12.47□□□□□ -0.41
HMGCS1-205ENST00000508319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 A0A1W2PPV9 198 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 BLACEA4D250 179 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 FITM1A5D6W6 292 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 AGPSO00116 658 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 PEX12O00623 359 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 DSCR3O14972 297 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CEP104O60308 925 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 AVILO75366 819 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 FKBP9O95302 570 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 IGHEP01854 428 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 OGNP20774 298 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ALAS2P22557 587 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ATP5DP30049 168 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CCNFP41002 786 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 MAGEA6P43360 314 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ADARP55265 1226 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms