RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RAB3IPQ96QF0 476 aaPredicted RBP4.08□□□□□ -1.76
SMC4-224ENST00000494612 CCDC3Q9BQI4 270 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 GREB1LQ9C091 1923 aaPredicted RBP4.08□□□□□ -1.76
SMC4-224ENST00000494612 SDF2L1Q9HCN8 221 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 GKN1Q9NS71 199 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 POMT1Q9Y6A1 747 aa4.08□□□□□ -1.76
SMC4-224ENST00000494612 TSPOAP1O95153 1857 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 ABCA5Q8WWZ7 1642 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 GRIN2AQ12879 1464 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 ABCC10Q5T3U5 1492 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 TRAV34A0A0B4J273 112 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 BMPR1BO00238 502 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 GSRP00390 522 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 NGFP01138 241 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 TSHBP01222 138 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 PRSS1P07477 247 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 HAPLN1P10915 354 aaPredicted RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 TCF4P15884 667 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 IFNAR1P17181 557 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 EEF1B2P24534 225 aaKnown RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 TLX1P31314 330 aaPredicted RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 DCTP40126 519 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 GP5P40197 560 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 CAPZA1P52907 286 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 PHEXP78562 749 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 MAT1AQ00266 395 aaKnown RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 SQLEQ14534 574 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 ACCSLQ4AC99 568 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 PRR27Q6MZM9 219 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 SLC27A1Q6PCB7 646 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 C19orf48Q6RUI8 117 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 TRMT1LQ7Z2T5 733 aaKnown RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 METTL23Q86XA0 190 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 ZNF611Q8N823 705 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 GOT1L1Q8NHS2 421 aaPredicted RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 VANGL1Q8TAA9 524 aaPredicted RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 CCDC107Q8WV48 283 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 PIGBQ92521 554 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 ARSGQ96EG1 525 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 FERMT1Q9BQL6 677 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 PRRG4Q9BZD6 226 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 CDH20Q9HBT6 801 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 ZNF334Q9HCZ1 680 aaPredicted RBP4.07□□□□□ -1.76
SMC4-224ENST00000494612 DNAJC4Q9NNZ3 241 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 NME7Q9Y5B8 376 aa4.07□□□□□ -1.76
SMC4-224ENST00000494612 SHROOM2Q13796 1616 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 ADAMTS12P58397 1594 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 DIP2BQ9P265 1576 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 IGLV9-49A0A0B4J1Y8 123 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 FAM86B1E9PN63 330 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 ZNF197O14709 1029 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 CLIC2O15247 247 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 SOCS5O75159 536 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 KRT36O76013 467 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 DDHD2O94830 711 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 FAM86B2P0C5J1 330 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 FGF5P12034 268 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 SCG2P13521 617 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 CA4P22748 312 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 SLC6A6P31641 620 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 PTGER4P35408 488 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 NKX2-1P43699 371 aaPredicted RBP4.06□□□□□ -1.76
SMC4-224ENST00000494612 ASCL1P50553 236 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 BMXP51813 675 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 GSDMDP57764 484 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 TAF10Q12962 218 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 CUL3Q13618 768 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 ZRSR1Q15695 479 aaKnown RBP4.06□□□□□ -1.76
SMC4-224ENST00000494612 ALDH1L2Q3SY69 923 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 CCDC184Q52MB2 194 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 XKR3Q5GH77 459 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 LINGO4Q6UY18 593 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 RBMS3Q6XE24 437 aaKnown RBP4.06□□□□□ -1.76
SMC4-224ENST00000494612 SPATA21Q7Z572 469 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 MMD2Q8IY49 270 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 LGI2Q8N0V4 545 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 MAPKAPK5-AS1Q8N8E1 139 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 KCNE4Q8WWG9 221 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 TM9SF4Q92544 642 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 NSMAFQ92636 917 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 SENP5Q96HI0 755 aaPredicted RBP4.06□□□□□ -1.76
SMC4-224ENST00000494612 FAM20AQ96MK3 541 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 THUMPD3Q9BV44 507 aaKnown RBP4.06□□□□□ -1.76
SMC4-224ENST00000494612 MMP28Q9H239 520 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 RAB9BQ9NP90 201 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 COQ3Q9NZJ6 369 aa4.06□□□□□ -1.76
SMC4-224ENST00000494612 MAPKBP1O60336 1514 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 ABCA10Q8WWZ4 1543 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 NUP160Q12769 1436 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 PRG4Q92954 1404 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 LOC101059948A0A1B0GTJ6 334 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 A0A1W2PPK0 400 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 PIGNO95427 931 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 GBAP04062 536 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 CSN3P07498 182 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 CDH3P22223 829 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 CD27P26842 260 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms