RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 N4BP2L2Q92802 583 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF669Q96BR6 464 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-219ENST00000494069 PBKQ96KB5 322 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 GBP5Q96PP8 586 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 PANX3Q96QZ0 392 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 MIPEPQ99797 713 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 HOMER3Q9NSC5 361 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 TRMT1Q9NXH9 659 aaKnown RBP8.21□□□□□ -1.1
LRCH3-219ENST00000494069 EURLQ9NYK6 297 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 STOX2Q9P2F5 926 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-219ENST00000494069 ANAPC2Q9UJX6 822 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 SLC39A10Q9ULF5 831 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 PLCL2Q9UPR0 1127 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 PLAAQ9Y263 795 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 JRKLQ9Y4A0 524 aa8.21□□□□□ -1.1
LRCH3-219ENST00000494069 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 ZCWPW2A0A1B0GU75 182 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 A0A1W2PPV9 198 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 AP3B1O00203 1094 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 ZSCAN9O15535 394 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CTSVO60911 334 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 MED26O95402 600 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 S1PR4O95977 384 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CHRM3P20309 590 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 AGXTP21549 392 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 OTX2P32243 289 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 GCGRP47871 477 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 MLLT10P55197 1068 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 KLRB1Q12918 225 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CTBP1Q13363 440 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 RAPSNQ13702 412 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 ATP1A4Q13733 1029 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 DHX34Q14147 1143 aaKnown RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 GBX1Q14549 363 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 SF1Q15637 639 aaKnown RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 NADK2Q4G0N4 442 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 MRNIPQ6NTE8 343 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 RHBDD2Q6NTF9 364 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 NEPROQ6NW34 567 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF549Q6P9A3 640 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CCDC137Q6PK04 289 aaKnown RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 FIGLAQ6QHK4 219 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 SDCCAG8Q86SQ7 713 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 LRRC6Q86X45 466 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CILP2Q8IUL8 1156 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 DENND6AQ8IWF6 608 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 NAT8LQ8N9F0 302 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 TEX19Q8NA77 164 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 FDCSPQ8NFU4 85 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 GIMAP7Q8NHV1 300 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 SERPINB12Q96P63 405 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 OSBPL9Q96SU4 736 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CHRNA10Q9GZZ6 450 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 SYNPO2LQ9H987 977 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 GRPEL1Q9HAV7 217 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 ACSS2Q9NR19 701 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 FBXO6Q9NRD1 293 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 MED16Q9Y2X0 877 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 PTRH2Q9Y3E5 179 aaKnown RBP8.2□□□□□ -1.1
LRCH3-219ENST00000494069 AP1M2Q9Y6Q5 423 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 CCDC88CQ9P219 2028 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 NBASA2RRP1 2371 aa8.2□□□□□ -1.1
LRCH3-219ENST00000494069 UBR5O95071 2799 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SDR42E2A6NKP2 422 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 USP27XA6NNY8 438 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 ARHGEF33A8MVX0 844 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 C9J4A7 227 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 PGRMC1O00264 195 aaKnown RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 NRDCO43847 1150 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 KIF5CO60282 957 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 BANF1O75531 89 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 MATN4O95460 622 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 ESR1P03372 595 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 RPN2P04844 631 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 UMODP07911 640 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 HBQ1P09105 142 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 PKMP14618 531 aaKnown RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 OGNP20774 298 aaKnown RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 ALAS2P22557 587 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 MAGEA3P43357 314 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 DCDP81605 110 aaKnown RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 MPP1Q00013 466 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 CUL1Q13616 776 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 KLHL38Q2WGJ6 581 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 NKAIN1Q4KMZ8 207 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF470Q6ECI4 717 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 FRMPD2BQ6IN97 320 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SUSD1Q6UWL2 747 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 TTLL10Q6ZVT0 673 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 METTL27Q8N6F8 245 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 MCUQ8NE86 351 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 OR2A1Q8NGT9 310 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 GSDMBQ8TAX9 411 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SEC14L1Q92503 715 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms