RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 FIGLAQ6QHK4 219 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 CILP2Q8IUL8 1156 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
UFD1-210ENST00000494054 MCUQ8NE86 351 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 FDCSPQ8NFU4 85 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 PROKR1Q8TCW9 393 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 COG1Q8WTW3 980 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 SKA2Q8WVK7 121 aaPredicted RBP9.37□□□□□ -0.91
UFD1-210ENST00000494054 SLC22A18Q96BI1 424 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 TCF12Q99081 682 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 NDC1Q9BTX1 674 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 DHRS4Q9BTZ2 278 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 NUDT9Q9BW91 350 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 IRAK4Q9NWZ3 460 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 IFT80Q9P2H3 777 aaPredicted RBP9.37□□□□□ -0.91
UFD1-210ENST00000494054 MED16Q9Y2X0 877 aa9.37□□□□□ -0.91
UFD1-210ENST00000494054 PTRH2Q9Y3E5 179 aaKnown RBP9.37□□□□□ -0.91
UFD1-210ENST00000494054 ZCWPW2A0A1B0GU75 182 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 FAM237BA0A1B0GVD1 139 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 SDR42E2A6NKP2 422 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 CTSVO60911 334 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 MATN4O95460 622 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 UMODP07911 640 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 MLNP12872 115 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 PKMP14618 531 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 CHRM3P20309 590 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 OGNP20774 298 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 ALAS2P22557 587 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 ADARP55265 1226 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 SARNPP82979 210 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 CTBP1Q13363 440 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 DHX34Q14147 1143 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 SSPNQ14714 243 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 RNF187Q5TA31 235 aaPredicted RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 CASC4Q6P4E1 433 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 ZNF549Q6P9A3 640 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 TTC23LQ6PF05 361 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 TTLL10Q6ZVT0 673 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 PPP1R32Q7Z5V6 425 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 MRGPREQ86SM8 312 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 RAB43Q86YS6 212 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 DENND6AQ8IWF6 608 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 SLC35F6Q8N357 371 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 DTWD1Q8N5C7 304 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 OR2A1Q8NGT9 310 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 OR2Y1Q8NGV0 311 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 GIMAP7Q8NHV1 300 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 GSDMBQ8TAX9 411 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 HMGCLL1Q8TB92 370 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 ZUFSPQ96AP4 578 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 MIB2Q96AX9 1013 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 SIGLEC10Q96LC7 697 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 ZNF285Q96NJ3 590 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 SERPINB12Q96P63 405 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 MIPEPQ99797 713 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 TXLNGQ9NUQ3 528 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 SRPK3Q9UPE1 567 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 PADI2Q9Y2J8 665 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 SPENQ96T58 3664 aaKnown RBP9.36□□□□□ -0.91
UFD1-210ENST00000494054 CCDC88CQ9P219 2028 aa9.36□□□□□ -0.91
UFD1-210ENST00000494054 LOC105369274A0A096LPK9 316 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 LOC102723532A0A0G2JNH3 316 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 MAGEB16A2A368 324 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 TARM1B6A8C7 271 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 H3BMM5 538 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 PGRMC1O00264 195 aaKnown RBP9.35□□□□□ -0.91
UFD1-210ENST00000494054 NRDCO43847 1150 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 MED26O95402 600 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 ONECUT2O95948 504 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 PAMP19021 973 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 CCNFP41002 786 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 FOLR3P41439 243 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 MAGEA3P43357 314 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 CD97P48960 835 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 CLCN7P51798 805 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 SRSF1Q07955 248 aaKnown RBP eCLIP9.35□□□□□ -0.91
UFD1-210ENST00000494054 PTPN13Q12923 2485 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 RAPSNQ13702 412 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 CYP2A13Q16696 494 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 KLHL38Q2WGJ6 581 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 ZC3H12BQ5HYM0 836 aaKnown RBP9.35□□□□□ -0.91
UFD1-210ENST00000494054 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 ZNF470Q6ECI4 717 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 FRMPD2BQ6IN97 320 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 MED25Q71SY5 747 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 COX15Q7KZN9 410 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 OR4N4Q8N0Y3 316 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 METTL27Q8N6F8 245 aaPredicted RBP9.35□□□□□ -0.91
UFD1-210ENST00000494054 NAT8LQ8N9F0 302 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 OR2L3Q8NG85 312 aa9.35□□□□□ -0.91
UFD1-210ENST00000494054 OR9A1PQ8NGU1 263 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms