RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RAP2CQ9Y3L5 183 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 ANGPTL3Q9Y5C1 460 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 PPP6CO00743 305 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 UBFD1O14562 309 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 OR7A17O14581 309 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 KHNYNO15037 678 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 RETP07949 1114 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 GIMD1P0DJR0 217 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 EPORP19235 508 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 DRD4P21917 467 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CCND1P24385 295 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 MPSTP25325 297 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 FASLGP48023 281 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 PKNOX1P55347 436 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 MAZP56270 477 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 HHEXQ03014 270 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CDC16Q13042 620 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 TRAF3Q13114 568 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 PRKAA1Q13131 559 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 GPR18Q14330 331 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CCDC6Q16204 474 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 RBBP7Q16576 425 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 C14orf28Q4W4Y0 310 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CUZD1Q86UP6 607 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 THOC6Q86W42 341 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 AMIGO1Q86WK6 493 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 ARL14Q8N4G2 192 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF781Q8N8C0 355 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SNX31Q8N9S9 440 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 LMNTD1Q8N9Z9 388 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 LINC01555Q8NAE3 123 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 KYQ8NBH2 561 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 GPR156Q8NFN8 814 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SAP25Q8TEE9 199 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 LCN9Q8WX39 176 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 JPH3Q8WXH2 748 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SMPDL3AQ92484 453 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SHCBP1LQ9BZQ2 653 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 ILKAPQ9H0C8 392 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SMOC1Q9H4F8 434 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 STN1Q9H668 368 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 NOL11Q9H8H0 719 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 IPPKQ9H8X2 491 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 INTS7Q9NVH2 962 aaKnown RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 PSD3Q9NYI0 1048 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 NLGN3Q9NZ94 848 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 OR6C2Q9NZP2 312 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 GMEB2Q9UKD1 530 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 SLC22A14Q9Y267 594 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-231ENST00000494043 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 ANKRD12Q6UB98 2062 aa11.04□□□□□ -0.64
MCF2L-231ENST00000494043 WDR87Q6ZQQ6 2873 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 A0A1W2PPV9 198 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 KATNA1O75449 491 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ESRRBO95718 433 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 OTCP00480 354 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ENGP17813 658 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 CCNG1P51959 295 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SH3BP2P78314 561 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TSTA3Q13630 321 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-231ENST00000494043 PLCL1Q15111 1095 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 PRAMEF13Q5VWM6 474 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 CGB2Q6NT52 195 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SUSD1Q6UWL2 747 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 LCTLQ6UWM7 567 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TMEM26Q6ZUK4 368 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 GPRIN3Q6ZVF9 776 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 GATAD2AQ86YP4 633 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 KIRREL3Q8IZU9 778 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 C2orf73Q8N5S3 287 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SUMF1Q8NBK3 374 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 OR52B6Q8NGF0 335 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 OR2I1PQ8NGU4 316 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TCEAL3Q969E4 200 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 OR4K3Q96R72 315 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 MIPEPQ99797 713 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 GTPBP2Q9BX10 602 aaKnown RBP11.03□□□□□ -0.64
MCF2L-231ENST00000494043 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 PCBD2Q9H0N5 130 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 SRMSQ9H3Y6 488 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 UCK1Q9HA47 277 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TNFRSF12AQ9NP84 129 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 PNPOQ9NVS9 261 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 GPRC5BQ9NZH0 403 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ZDHHC2Q9UIJ5 367 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
MCF2L-231ENST00000494043 TDRD6O60522 2096 aaKnown RBP11.03□□□□□ -0.64
MCF2L-231ENST00000494043 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-231ENST00000494043 PI4KAP42356 2102 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms