RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 VSTM2BA6NLU5 285 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 CARSP49589 748 aaKnown RBP18.25■□□□□ 0.51
GGPS1-206ENST00000488594 UNC5DQ6UXZ4 953 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 DCUN1D3Q8IWE4 304 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 ASZ1Q8WWH4 475 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 ZNF285Q96NJ3 590 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 SELENOSQ9BQE4 189 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 TRIM56Q9BRZ2 755 aaKnown RBP18.25■□□□□ 0.51
GGPS1-206ENST00000488594 SOX17Q9H6I2 414 aaPredicted RBP18.25■□□□□ 0.51
GGPS1-206ENST00000488594 IMPACTQ9P2X3 320 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 CTSFQ9UBX1 484 aa18.25■□□□□ 0.51
GGPS1-206ENST00000488594 CCDC88CQ9P219 2028 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 NUP210LQ5VU65 1888 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 DIDO1Q9BTC0 2240 aaKnown RBP18.24■□□□□ 0.51
GGPS1-206ENST00000488594 CCDC162PA2VCL2 907 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 SRPX2O60687 465 aaPredicted RBP18.24■□□□□ 0.51
GGPS1-206ENST00000488594 METTL18O95568 372 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 HPP00738 406 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 PRF1P14222 555 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 HSPA14Q0VDF9 509 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 SF1Q15637 639 aaKnown RBP18.24■□□□□ 0.51
GGPS1-206ENST00000488594 INAQ16352 499 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 FIGLAQ6QHK4 219 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 SHISA6Q6ZSJ9 500 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 NLRP9Q7RTR0 991 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 LINC00523Q86TU6 105 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 FAM71DQ8N9W8 422 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 OR2L8Q8NGY9 312 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.24■□□□□ 0.51
GGPS1-206ENST00000488594 ZUFSPQ96AP4 578 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 CRB3Q9BUF7 120 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 RAB11FIP5Q9BXF6 653 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 COPG2Q9UBF2 871 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 TFR2Q9UP52 801 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 CROCCQ5TZA2 2017 aa18.24■□□□□ 0.51
GGPS1-206ENST00000488594 TEP1Q99973 2627 aaKnown RBP18.24■□□□□ 0.51
GGPS1-206ENST00000488594 GOLGA6L9A6NEM1 432 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 OR51F1A6NGY5 319 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 TARM1B6A8C7 271 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 PRSS44E7EML9 344 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 JRKO75564 520 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 GAS8O95995 478 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 ACPPP15309 386 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 MCM3P25205 808 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 CCR7P32248 378 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 TBX2Q13207 712 aaPredicted RBP18.23■□□□□ 0.51
GGPS1-206ENST00000488594 PRMT9Q6P2P2 845 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 AFTPHQ6ULP2 937 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 LINC00696Q6ZRV3 163 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 FJX1Q86VR8 437 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 RELTQ969Z4 430 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 UNKQ9C0B0 810 aaKnown RBP18.23■□□□□ 0.51
GGPS1-206ENST00000488594 SLC39A10Q9ULF5 831 aa18.23■□□□□ 0.51
GGPS1-206ENST00000488594 DYTNA2CJ06 578 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 MAP2K7O14733 419 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 OR1I1O60431 355 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 USP1O94782 785 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 APOA4P06727 396 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 FDXRP22570 491 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 PPARGP37231 505 aaPredicted RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 GRIA3P42263 894 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 OR1D4P47884 311 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 CSE1LP55060 971 aaKnown RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 OCA2Q04671 838 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 Q0VFX4 171 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 TTC23LQ6PF05 361 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 MCEMP1Q8IX19 187 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 KBTBD2Q8IY47 623 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 C2orf73Q8N5S3 287 aaPredicted RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 OR1N1Q8NGS0 311 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 PIH1D1Q9NWS0 290 aaKnown RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 ZNF282Q9UDV7 671 aaPredicted RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 FAM169AQ9Y6X4 670 aa18.22■□□□□ 0.51
GGPS1-206ENST00000488594 MDC1Q14676 2089 aaKnown RBP18.22■□□□□ 0.51
GGPS1-206ENST00000488594 CNTRLQ7Z7A1 2325 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 HYKKA2RU49 373 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 RASGRF2O14827 1237 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 PCDH17O14917 1159 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 GPC4O75487 556 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 KLHL18O94889 574 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 CYLC1P35663 651 aaPredicted RBP18.21■□□□□ 0.51
GGPS1-206ENST00000488594 ARG2P78540 354 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 ART3Q13508 389 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 GRB7Q14451 532 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 ZNF324BQ6AW86 544 aaPredicted RBP18.21■□□□□ 0.51
GGPS1-206ENST00000488594 TAX1BP1Q86VP1 789 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 VRK3Q8IV63 474 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 RAB42Q8N4Z0 105 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 CATSPER1Q8NEC5 780 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 OR13J1Q8NGT2 312 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 CFAP61Q8NHU2 1237 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 HDAC10Q969S8 669 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 MRFAP1L1Q96HT8 127 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 IL17FQ96PD4 163 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 ZNF160Q9HCG1 818 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 ZNF304Q9HCX3 659 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 RIMKLBQ9ULI2 386 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms