RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 GSTA1P08263 222 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 RBP1P09455 135 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 PYGBP11216 843 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 KCNC1P48547 511 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 CLDN6P56747 220 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 PPP1CAP62136 330 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 FASTKQ14296 549 aaKnown RBP18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 CASP8Q14790 479 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 SLC5A12Q1EHB4 618 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 KRT71Q3SY84 523 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 SPESP1Q6UW49 350 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 B3GNT8Q7Z7M8 397 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 SYTL1Q8IYJ3 562 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 TCAIMQ8N3R3 496 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 LIN37Q96GY3 246 aaPredicted RBP18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 CCDC74BQ96LY2 380 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 MAP3K3Q99759 626 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 PITPNM3Q9BZ71 974 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 ALG9Q9H6U8 611 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 C1GALT1Q9NS00 363 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 PCMTD2Q9NV79 361 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 ZNF358Q9NW07 568 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 DCDC2Q9UHG0 476 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 RNF112Q9ULX5 631 aa18.72■□□□□ 0.59
PCOLCE-208ENST00000487172 PCM1Q15154 2024 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 CFAP54Q96N23 3096 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 SYCE1LA8MT33 242 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 GUCA1CO95843 209 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 UGT2B7P16662 529 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 CCND1P24385 295 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 MPSTP25325 297 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 GLRBP48167 497 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 SLC18A2Q05940 514 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 TARDBPQ13148 414 aaKnown RBP eCLIP18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 ZXDCQ2QGD7 858 aaPredicted RBP18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 TECRLQ5HYJ1 363 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 CEP85LQ5SZL2 805 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 CACHD1Q5VU97 1274 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 MBOAT1Q6ZNC8 495 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 FAM92BQ6ZTR7 304 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 TRABD2AQ86V40 505 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 KMT5CQ86Y97 462 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 C2orf73Q8N5S3 287 aaPredicted RBP18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 LMNTD1Q8N9Z9 388 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 PDPRQ8NCN5 879 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 OR2A1Q8NGT9 310 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 OR56A3Q8NH54 315 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 KLHL6Q8WZ60 621 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 RHBDF1Q96CC6 855 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 STRADBQ9C0K7 418 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 WASF3Q9UPY6 502 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 PCDHB11Q9Y5F2 797 aa18.71■□□□□ 0.59
PCOLCE-208ENST00000487172 GOLGA8RI6L899 631 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 KIF1CO43896 1103 aaKnown RBP18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 ADRB1P08588 477 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 GGT5P36269 586 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 FOXC1Q12948 553 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 EIF3IQ13347 325 aaKnown RBP18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 PHF19Q5T6S3 580 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 SULT1C3Q6IMI6 304 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 KLHDC8AQ8IYD2 350 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 PPFIBP2Q8ND30 876 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 EGFL8Q99944 293 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 MRPL57Q9BQC6 102 aaKnown RBP18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 SGPP1Q9BX95 441 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 PCBD2Q9H0N5 130 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 ZNF768Q9H5H4 540 aaKnown RBP18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 CCDC177Q9NQR7 707 aaPredicted RBP18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 NUDT4Q9NZJ9 180 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 KLHL3Q9UH77 587 aa18.7■□□□□ 0.58
PCOLCE-208ENST00000487172 A0A0J9YY10 115 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 FOXO6A8MYZ6 492 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 MAP2K7O14733 419 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 HYAL3O43820 417 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 KLK8O60259 260 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 GLRA3O75311 464 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 TOP3BO95985 862 aaKnown RBP18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 MTHFD2P13995 350 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 KRT4P19013 534 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CDH3P22223 829 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CRHR1P34998 444 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 LSSP48449 732 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CCT5P48643 541 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 NAE1Q13564 534 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 SF1Q15637 639 aaKnown RBP18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 TNFAIP8L3Q5GJ75 292 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 SNAP47Q5SQN1 464 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CAPN13Q6MZZ7 669 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 SUSD1Q6UWL2 747 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 TAX1BP1Q86VP1 789 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 TMEM151AQ8N4L1 468 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 SLC41A2Q96JW4 573 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CMKLR1Q99788 373 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 ATG10Q9H0Y0 220 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 TMEM216Q9P0N5 145 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 SENP1Q9P0U3 644 aa18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 PTBP2Q9UKA9 531 aaKnown RBP18.69■□□□□ 0.58
PCOLCE-208ENST00000487172 CCDC187A0A096LP49 1063 aa18.68■□□□□ 0.58
PCOLCE-208ENST00000487172 IGHV5-51A0A0C4DH38 117 aa18.68■□□□□ 0.58
PCOLCE-208ENST00000487172 A8MU76 341 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms