RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PYCR2Q96C36 320 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 MED8Q96G25 268 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 MARK4Q96L34 752 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 C3orf30Q96M34 536 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 WDR92Q96MX6 357 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 GUCD1Q96NT3 240 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CDK15Q96Q40 435 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 UHRF1Q96T88 793 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 MYOCQ99972 504 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TRIT1Q9H3H1 467 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 OSGEPL1Q9H4B0 414 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TUBB1Q9H4B7 451 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 EFCAB1Q9HAE3 211 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 LTB4R2Q9NPC1 389 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TMEM45AQ9NWC5 275 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 GPRC5BQ9NZH0 403 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 USP36Q9P275 1121 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 GULP1Q9UBP9 304 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF490Q9ULM2 529 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 DMTF1Q9Y222 760 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SLC22A14Q9Y267 594 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SLC17A4Q9Y2C5 497 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 RNF11Q9Y3C5 154 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 DYRK1BQ9Y463 629 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PRKAB1Q9Y478 270 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ST14Q9Y5Y6 855 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 KCNE2Q9Y6J6 123 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 RANBP2P49792 3224 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 F5P12259 2224 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SERTM1A2A2V5 107 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 BBIP1A8MTZ0 92 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PRAMEF26H0Y7S4 382 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 MANBAO00462 879 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 TNFRSF10CO14798 259 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FFAR3O14843 346 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SNPHO15079 494 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 GPR42O15529 346 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 LATO43561 262 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PI15O43692 258 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CIB2O75838 187 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 RASSF9O75901 435 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SLC16A8O95907 504 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ALDOCP09972 364 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PRR35P0CG20 571 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ACP5P13686 325 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 JUPP14923 745 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 GNAZP19086 355 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PGM1P36871 562 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 GNPDA1P46926 289 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CLCNKAP51800 687 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 THOP1P52888 689 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 EMX2Q04743 252 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CHIT1Q13231 466 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ART3Q13508 389 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PTK2BQ14289 1009 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 GRB7Q14451 532 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ARHGAP19Q14CB8 494 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ABRAXAS2Q15018 415 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 MMEL1Q495T6 779 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CCSMST1Q4G0I0 132 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 PYCR3Q53H96 274 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 XKR6Q5GH73 641 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 TCHHL1Q5QJ38 904 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 C6orf136Q5SQH8 315 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 KIAA0895LQ68EN5 471 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ANO7Q6IWH7 933 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SCIMPQ6UWF3 145 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FAM83HQ6ZRV2 1179 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 Q6ZS52 159 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 TRIM46Q7Z4K8 759 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 TBC1D21Q8IYX1 336 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FAM9CQ8IZT9 166 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 DCBLD1Q8N8Z6 715 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FNDC5Q8NAU1 212 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 TSPEARQ8WU66 669 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF480Q8WV37 535 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SELENOMQ8WWX9 145 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 OR2M4Q96R27 311 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 MIPEPQ99797 713 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SLC25A23Q9BV35 468 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 RAB11FIP5Q9BXF6 653 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CADM1Q9BY67 442 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 MRPL1Q9BYD6 325 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 ELOVL6Q9H5J4 265 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 FZD3Q9NPG1 666 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CCDC177Q9NQR7 707 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 INTS7Q9NVH2 962 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 AIG1Q9NVV5 245 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 WSB2Q9NYS7 404 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.31
SF3A3-206ENST00000487062 CCDC167Q9P0B6 97 aa6.84□□□□□ -1.31
SF3A3-206ENST00000487062 SPATA7Q9P0W8 599 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms