RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 STK32CQ86UX6 486 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 ERI1Q8IV48 349 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 PHACTR4Q8IZ21 702 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 TMEM132CQ8N3T6 1108 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 IRF7Q92985 503 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 FAM83DQ9H4H8 585 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PRAMEF4O60810 478 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 MTX2O75431 263 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 AP2A2O94973 939 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 THRBP10828 461 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 TYRP14679 529 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 TACR1P25103 407 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 DDX6P26196 483 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 RGS19P49795 217 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 GZMMP51124 257 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 CCNYL2Q5T2Q4 361 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PRAMEF9Q5VWM5 478 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 HSD11B1LQ7Z5J1 315 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 ZDHHC13Q8IUH4 622 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 RASGRP3Q8IV61 690 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 ELMO1Q92556 727 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 SCAMP4Q969E2 229 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 FBXL8Q96CD0 374 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 FAM120BQ96EK7 910 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 APIPQ96GX9 242 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 RDH12Q96NR8 316 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 TSSK3Q96PN8 268 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 HEPHQ9BQS7 1158 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 NPLQ9BXD5 320 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 SPHK2Q9NRA0 654 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 DCAF13Q9NV06 445 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PPT2Q9UMR5 302 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 G3V2T6 193 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 SGTAO43765 313 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 CREG1O75629 220 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PRKD3O94806 890 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 CST1P01037 141 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 ACRP10323 421 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 JUPP14923 745 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 AMD1P17707 334 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 ITPKAP23677 461 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 HNRNPFP52597 415 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PLCL1Q15111 1095 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 PON2Q15165 354 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 TEAD2Q15562 447 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 FRG2Q64ET8 278 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 POP5Q969H6 163 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 SDCCAG3Q96C92 435 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 DTNBP1Q96EV8 351 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 FRG2BQ96QU4 278 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 HHIPQ96QV1 700 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 MAGIXQ9H6Y5 334 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 TIMMDC1Q9NPL8 285 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 ERVW-1Q9UQF0 538 aa17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 MAGED1Q9Y5V3 778 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-207ENST00000486828 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 CROCCQ5TZA2 2017 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 ZNF701M0R085 212 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 MOSPD3O75425 235 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 FTH1P02794 183 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 PTPN6P29350 595 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 HALP42357 657 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 EPHA5P54756 1037 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 PFN3P60673 137 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 KCNC3Q14003 757 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 ZIK1Q3SY52 487 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 MSANTD1Q6ZTZ1 278 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 CYP2U1Q7Z449 544 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 SVOPLQ8N434 492 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 ASZ1Q8WWH4 475 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 NCLNQ969V3 563 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 AURKBQ96GD4 344 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 FCRL1Q96LA6 429 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 MUS81Q96NY9 551 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 INPP5KQ9BT40 448 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 HPS4Q9NQG7 708 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
PDLIM7-207ENST00000486828 PTPRSQ13332 1948 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 A0A1B0GVG6 124 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 TSPAN11A1L157 253 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 KRT87PA6NCN2 255 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 WNT9AO14904 365 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 FGF19O95750 216 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 IL1RNP18510 177 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 CHIT1Q13231 466 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 PGS1Q32NB8 556 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 TMEM215Q68D42 235 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 Q6ZVL8 140 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 KIAA0907Q7Z7F0 614 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 GPR180Q86V85 440 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 CLVS1Q8IUQ0 354 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 TRAM1L1Q8N609 369 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 CSGALNACT1Q8TDX6 532 aa17.47■□□□□ 0.39
PDLIM7-207ENST00000486828 FRS2Q8WU20 508 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms