RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SFRP1Q8N474 314 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 CCDC63Q8NA47 563 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 PPFIBP2Q8ND30 876 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 GPR156Q8NFN8 814 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 OR4E2Q8NGC2 313 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 IFI44Q8TCB0 444 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 CCDC74AQ96AQ1 378 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 MTBPQ96DY7 904 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 HIST1H2AHQ96KK5 128 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 HIST1H2AJQ99878 128 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 EGFL8Q99944 293 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 MCMBPQ9BTE3 642 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 H2AFJQ9BTM1 129 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 TRIT1Q9H3H1 467 aaKnown RBP5.47□□□□□ -1.53
COPS3-208ENST00000486032 SLC32A1Q9H598 525 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 ALG9Q9H6U8 611 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 PPCSQ9HAB8 311 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 POPDC3Q9HBV1 291 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 NEUROD4Q9HD90 331 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 PRM3Q9NNZ6 103 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 POT1Q9NUX5 634 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 KCNK4Q9NYG8 393 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 CPSF2Q9P2I0 782 aaKnown RBP5.47□□□□□ -1.53
COPS3-208ENST00000486032 KLHL3Q9UH77 587 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 ADAMTS6Q9UKP5 1117 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 PCOLCE2Q9UKZ9 415 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 NOVA2Q9UNW9 492 aaKnown RBP5.47□□□□□ -1.53
COPS3-208ENST00000486032 PCDHGB2Q9Y5G2 931 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 HEBP2Q9Y5Z4 205 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 WDFY3Q8IZQ1 3526 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 CABIN1Q9Y6J0 2220 aa5.47□□□□□ -1.53
COPS3-208ENST00000486032 ASPMQ8IZT6 3477 aa5.46□□□□□ -1.53
COPS3-208ENST00000486032 ASCC3Q8N3C0 2202 aaKnown RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 GSAPA4D1B5 854 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 EME2A4GXA9 379 aaPredicted RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 A6NCN8 305 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OR6C74A6NCV1 312 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 A8MU76 341 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 ISM1B1AKI9 464 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 UBXN8O00124 270 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 COPEO14579 308 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 TCEA3O75764 348 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 TSPAN12O95859 305 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 RPN2P04844 631 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 RPLP0P05388 317 aaKnown RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 CD1DP15813 335 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 CREB1P16220 341 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 GLB1P16278 677 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 CKMT2P17540 419 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 XRCC1P18887 633 aaPredicted RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 KRT4P19013 534 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 POLR2CP19387 275 aaPredicted RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 MPSTP25325 297 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 ACADLP28330 430 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 NDUFS1P28331 727 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 ATP5DP30049 168 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 NOVA1P51513 510 aaKnown RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 ATP6V0D1P61421 351 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 UBE2IP63279 158 aaKnown RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 CCL7P80098 99 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 SLC14A1Q13336 389 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 GBX1Q14549 363 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OR4D1Q15615 310 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 PHKG1Q16816 387 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 FAM83EQ2M2I3 478 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 AGAP9Q5VTM2 703 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 LRRC8EQ6NSJ5 796 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 ARMC6Q6NXE6 501 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 KLC3Q6P597 504 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OGFOD3Q6PK18 319 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 LRIG3Q6UXM1 1119 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 UNC5DQ6UXZ4 953 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 WASH2PQ6VEQ5 465 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 TMEM26Q6ZUK4 368 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 USP53Q70EK8 1073 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 TDRPQ86YL5 185 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 GPSM1Q86YR5 675 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 DCUN1D3Q8IWE4 304 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 SYTL1Q8IYJ3 562 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 TBC1D21Q8IYX1 336 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 RIBC1Q8N443 379 aaPredicted RBP5.46□□□□□ -1.54
COPS3-208ENST00000486032 RAB42Q8N4Z0 105 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 ANKRD42Q8N9B4 389 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OR52E1Q8NGJ3 308 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OR9A1PQ8NGU1 263 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 OR5K2Q8NHB8 316 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 MAGEC3Q8TD91 643 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 MCOLN3Q8TDD5 553 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 NETO1Q8TDF5 533 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 LCN9Q8WX39 176 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 NCSTNQ92542 709 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 RAD51AP1Q96B01 352 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 SH3KBP1Q96B97 665 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 PTERQ96BW5 349 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 MED8Q96G25 268 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 CABS1Q96KC9 395 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 SMC6Q96SB8 1091 aa5.46□□□□□ -1.54
COPS3-208ENST00000486032 PKP4Q99569 1192 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms