RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 PKLRP30613 574 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 SEC24CP53992 1094 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 ATXN3P54252 364 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 LCP2Q13094 533 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 BIRC2Q13490 618 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 RBBP7Q16576 425 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 CAPN13Q6MZZ7 669 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 SUSD1Q6UWL2 747 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 ATG14Q6ZNE5 492 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 LRRC56Q8IYG6 542 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 LRRC34Q8IZ02 419 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 LSMEM2Q8N112 164 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 ARL14Q8N4G2 192 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 SUMF1Q8NBK3 374 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 LCN9Q8WX39 176 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 JPH3Q8WXH2 748 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 SORT1Q99523 831 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 SHCBP1LQ9BZQ2 653 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 EML4Q9HC35 981 aaKnown RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 CCDC177Q9NQR7 707 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 DNAJC11Q9NVH1 559 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 MLYCDO95822 493 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 PIK3CGP48736 1102 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 OGFOD3Q6PK18 319 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 THOC6Q86W42 341 aaKnown RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 RBM12BQ8IXT5 1001 aaKnown RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 OR4E2Q8NGC2 313 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 ATOH1Q92858 354 aaPredicted RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 C7orf26Q96N11 449 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 NOL11Q9H8H0 719 aaKnown RBP18.4■□□□□ 0.54
PCCB-216ENST00000483687 IPPKQ9H8X2 491 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 FGFR1OP2Q9NVK5 253 aa18.4■□□□□ 0.54
PCCB-216ENST00000483687 GMNCA6NCL1 334 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 PPP6CO00743 305 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 EDF1O60869 148 aaKnown RBP18.39■□□□□ 0.53
PCCB-216ENST00000483687 KATNA1O75449 491 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 GIMD1P0DJR0 217 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 CCND1P24385 295 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 SHMT2P34897 504 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 ARL1P40616 181 aaPredicted RBP18.39■□□□□ 0.53
PCCB-216ENST00000483687 FASLGP48023 281 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 GALNT1Q10472 559 aaPredicted RBP18.39■□□□□ 0.53
PCCB-216ENST00000483687 C14orf28Q4W4Y0 310 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 THEMIS2Q5TEJ8 643 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 KANSL1Q7Z3B3 1105 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 AMIGO1Q86WK6 493 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 KLHDC8AQ8IYD2 350 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 LINC01555Q8NAE3 123 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 KYQ8NBH2 561 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 GPR156Q8NFN8 814 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 OR2L8Q8NGY9 312 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 SMPDL3AQ92484 453 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 ATP6V1E2Q96A05 226 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 SH3KBP1Q96B97 665 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 DUSP23Q9BVJ7 150 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 SGPP1Q9BX95 441 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 SRMSQ9H3Y6 488 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 NLGN3Q9NZ94 848 aa18.39■□□□□ 0.53
PCCB-216ENST00000483687 GIPC1O14908 333 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 SNUPNO95149 360 aaKnown RBP18.38■□□□□ 0.53
PCCB-216ENST00000483687 ALPPL2P10696 532 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 CCNG1P51959 295 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 CDC16Q13042 620 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 TMEM26Q6ZUK4 368 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 CUZD1Q86UP6 607 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 C17orf82Q86X59 251 aaPredicted RBP18.38■□□□□ 0.53
PCCB-216ENST00000483687 ZNF761Q86XN6 746 aaPredicted RBP18.38■□□□□ 0.53
PCCB-216ENST00000483687 CRLF3Q8IUI8 442 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 MINDY1Q8N5J2 469 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 ZNF781Q8N8C0 355 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 ARL10Q8N8L6 244 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 OR52B6Q8NGF0 335 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 HMGCLL1Q8TB92 370 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 AGR3Q8TD06 166 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 ILKAPQ9H0C8 392 aaPredicted RBP18.38■□□□□ 0.53
PCCB-216ENST00000483687 IRF2BPLQ9H1B7 796 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 MID1IP1Q9NPA3 183 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 OR6C2Q9NZP2 312 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 RAP2CQ9Y3L5 183 aa18.38■□□□□ 0.53
PCCB-216ENST00000483687 UBFD1O14562 309 aaKnown RBP18.37■□□□□ 0.53
PCCB-216ENST00000483687 PPM1DO15297 605 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 PRKAA1Q13131 559 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.37■□□□□ 0.53
PCCB-216ENST00000483687 PRAMEF13Q5VWM6 474 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 OR4K3Q96R72 315 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 ZNF382Q96SR6 550 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 MIPEPQ99797 713 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 FAM107BQ9H098 131 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 EPN3Q9H201 632 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 LNP1A1A4G5 178 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 OR7A17O14581 309 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 OTCP00480 354 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 KITP10721 976 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 MPSTP25325 297 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 PRDX3P30048 256 aaKnown RBP18.37■□□□□ 0.53
PCCB-216ENST00000483687 SH3BP2P78314 561 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 SH2D4BQ5SQS7 431 aa18.37■□□□□ 0.53
PCCB-216ENST00000483687 ZCCHC8Q6NZY4 707 aaKnown RBP18.37■□□□□ 0.53
PCCB-216ENST00000483687 DCBLD1Q8N8Z6 715 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms