RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 FDXRP22570 491 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 ACVR1BP36896 505 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 STAT6P42226 847 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 GCLMP48507 274 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 CLCNKAP51800 687 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 EFNA3P52797 238 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 TERF1P54274 439 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 CDK17Q00537 523 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 OCRLQ01968 901 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 EEF1A2Q05639 463 aaKnown RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 DPTQ07507 201 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 ZNF648Q5T619 568 aaPredicted RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 CNSTQ6PJW8 725 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 UNC5DQ6UXZ4 953 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 Q6ZPA2 131 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 SV2BQ7L1I2 683 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 EPM2AIP1Q7L775 607 aaPredicted RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 TSPAN33Q86UF1 283 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 GPR135Q8IZ08 494 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 ZNF655Q8N720 491 aaPredicted RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 TMEM178AQ8NBL3 297 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 FAM98AQ8NCA5 519 aaKnown RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 SEMA6DQ8NFY4 1073 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 SEMA4DQ92854 862 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 LRRC27Q9C0I9 530 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 KCNF1Q9H3M0 494 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 WDR54Q9H977 334 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 SYTL2Q9HCH5 934 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 ARFGAP3Q9NP61 516 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 TXLNGQ9NUQ3 528 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 VPS18Q9P253 973 aa6.11□□□□□ -1.43
CHD6-209ENST00000482596 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 EIF3LQ9Y262 564 aaKnown RBP6.11□□□□□ -1.43
CHD6-209ENST00000482596 HMX2A2RU54 273 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 OR6C74A6NCV1 312 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 FAM157AC9JC47 383 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 KDELR3O43731 214 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 OR2B3O76000 313 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 CCDC166P0CW27 439 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 POLR2CP19387 275 aaPredicted RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 ZFP36P26651 326 aaKnown RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 VIPR1P32241 457 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 CCNFP41002 786 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 RPL34P49207 117 aaKnown RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 CDKN1CP49918 316 aaPredicted RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 PPP3CAQ08209 521 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 PKP1Q13835 747 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 GALNT3Q14435 633 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 BECN1Q14457 450 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 MAPKAPK3Q16644 382 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 KLHL35Q6PF15 583 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ABRAXAS1Q6UWZ7 409 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 NDUFAF7Q7L592 441 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 OTOAQ7RTW8 1153 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ADGRG6Q86SQ4 1221 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 PRSS58Q8IYP2 241 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 OR52N2Q8NGI0 321 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 FKBP10Q96AY3 582 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 AP2M1Q96CW1 435 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 CRB3Q9BUF7 120 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ZNF747Q9BV97 191 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 PANK2Q9BZ23 570 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ZYG11BQ9C0D3 744 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 C7orf69Q9H7B7 122 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 MMRN2Q9H8L6 949 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 FAM60AQ9NP50 221 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 TRMT1Q9NXH9 659 aaKnown RBP6.1□□□□□ -1.43
CHD6-209ENST00000482596 B4GALT7Q9UBV7 327 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ACAD8Q9UKU7 415 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 HPCAL4Q9UM19 191 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 HIF3AQ9Y2N7 669 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 ATP6V1DQ9Y5K8 247 aa6.1□□□□□ -1.43
CHD6-209ENST00000482596 SH3D21A4FU49 640 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 NPIPB15A6NHN6 443 aaPredicted RBP6.09□□□□□ -1.43
CHD6-209ENST00000482596 A8MUI8 341 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 DEFB108AA8MXU0 73 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 E5RJQ4 531 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 QSOX1O00391 747 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 TRAFD1O14545 582 aaPredicted RBP6.09□□□□□ -1.43
CHD6-209ENST00000482596 PIN1P1O15428 100 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 NUAK1O60285 661 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 NEURL1O76050 574 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 RBP3P10745 1247 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 ZNF8P17098 575 aaPredicted RBP6.09□□□□□ -1.43
CHD6-209ENST00000482596 SERPINA4P29622 427 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 ME1P48163 572 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 RAB28P51157 221 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 VLDLRP98155 873 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 KLC1Q07866 573 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 MTA1Q13330 715 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 INSCQ1MX18 579 aa6.09□□□□□ -1.43
CHD6-209ENST00000482596 GARNL3Q5VVW2 1013 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms