RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PCDHGA10Q9Y5H3 936 aa16.03■□□□□ 0.16
TRIM13-208ENST00000478111 CSAG2Q9Y5P2 127 aa16.03■□□□□ 0.16
TRIM13-208ENST00000478111 A0A1B0GX78 115 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 SOCS6O14544 535 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 KLHL41O60662 606 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 IPO13O94829 963 aaKnown RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 S1PR4O95977 384 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 ALBP02768 609 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 MMP11P24347 488 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 COL8A1P27658 744 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 FDFT1P37268 417 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 ARSFP54793 590 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 AIMP2Q13155 320 aaKnown RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 CYP2A13Q16696 494 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 FASTKD1Q53R41 847 aaKnown RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 FIGLAQ6QHK4 219 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 IGFL2Q6UWQ7 119 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 UNC5DQ6UXZ4 953 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 PPP1R21Q6ZMI0 780 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 TAX1BP1Q86VP1 789 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 DCUN1D3Q8IWE4 304 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 KRT222Q8N1A0 295 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 ZADH2Q8N4Q0 377 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 CFAP61Q8NHU2 1237 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 SLC22A18Q96BI1 424 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 TTC1Q99614 292 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 DESI2Q9BSY9 194 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 ILKAPQ9H0C8 392 aaPredicted RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 WDR54Q9H977 334 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 MARCH4Q9P2E8 410 aaPredicted RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 FBXL4Q9UKA2 621 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 HS3ST3B1Q9Y662 390 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 COPG1Q9Y678 874 aaKnown RBP16.02■□□□□ 0.16
TRIM13-208ENST00000478111 CAPN6Q9Y6Q1 641 aa16.02■□□□□ 0.16
TRIM13-208ENST00000478111 F8W8V4 182 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 RASGRF2O14827 1237 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 DSCR3O14972 297 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 ALOX12BO75342 701 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 GAS8O95995 478 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 CCSMST1Q4G0I0 132 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 KIRREL2Q6UWL6 708 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 NLRP9Q7RTR0 991 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 DTWD1Q8N5C7 304 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 PEX13Q92968 403 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 BAG1Q99933 345 aaPredicted RBP16.01■□□□□ 0.15
TRIM13-208ENST00000478111 RBSNQ9H1K0 784 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 P2RY12Q9H244 342 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 CHRAC1Q9NRG0 131 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 RAB6BQ9NRW1 208 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 CUTCQ9NTM9 273 aa16.01■□□□□ 0.15
TRIM13-208ENST00000478111 FITM1A5D6W6 292 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 KRT87PA6NCN2 255 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 ANKUB1A6NFN9 424 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 PRMT5O14744 637 aaPredicted RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 CTSVO60911 334 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 MED26O95402 600 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 IFNB1P01574 187 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 RPN2P04844 631 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 APOA4P06727 396 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 ITGA3P26006 1051 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 GLRBP48167 497 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 PRAMEP78395 509 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 SF1Q15637 639 aaKnown RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 HIF1AQ16665 826 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 YOD1Q5VVQ6 348 aaPredicted RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 PRAMEF13Q5VWM6 474 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 ZNF787Q6DD87 383 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 MAMDC2Q7Z304 686 aaPredicted RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 TM9SF4Q92544 642 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 MESP1Q9BRJ9 268 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 FRMD8P1Q9BZ68 369 aaPredicted RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16■□□□□ 0.15
TRIM13-208ENST00000478111 CDC23Q9UJX2 597 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 ZNF148Q9UQR1 794 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 SLC5A6Q9Y289 635 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 NFS1Q9Y697 457 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 APCP25054 2843 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 CROCCQ5TZA2 2017 aa16■□□□□ 0.15
TRIM13-208ENST00000478111 VSTM2BA6NLU5 285 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 TARM1B6A8C7 271 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 E7EVH7 732 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 CD3EAPO15446 510 aaKnown RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 PIM1P11309 404 aaPredicted RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 PPARGP37231 505 aaPredicted RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 OR1D4P47884 311 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 GRM7Q14831 915 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 ZC3H12BQ5HYM0 836 aaKnown RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 TCTE1Q5JU00 501 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 SHISA6Q6ZSJ9 500 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 SLC13A5Q86YT5 568 aaPredicted RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 HMGCLL1Q8TB92 370 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 DENND1AQ8TEH3 1009 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 UBE2Q2Q8WVN8 375 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 ZUFSPQ96AP4 578 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 WDR77Q9BQA1 342 aaPredicted RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 TSSK1BQ9BXA7 367 aa15.99■□□□□ 0.15
TRIM13-208ENST00000478111 SOX17Q9H6I2 414 aaPredicted RBP15.99■□□□□ 0.15
TRIM13-208ENST00000478111 TREX1Q9NSU2 369 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms