RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-222ENST00000478095 V9GYY5 206 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-222ENST00000478095 CHD8Q9HCK8 2581 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 A0A0J9YY10 115 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 NPEPPSL1A6NEC2 478 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 GFYI3L273 518 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 POLR1CO15160 346 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 NVLO15381 856 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 ZBTB14O43829 449 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SLU7O95391 586 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SLC16A8O95907 504 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 STMN1P16949 149 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 CYP2A7P20853 494 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SPRP35270 261 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 PMS2P54278 862 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 RAB15P59190 212 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 POU4F1Q01851 419 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SP140Q13342 867 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 NAB1Q13506 487 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 COL9A2Q14055 689 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 KIR2DS3Q14952 304 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SF1Q15637 639 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 ZIC1Q15915 447 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 PHKG1Q16816 387 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 DEFB110Q30KQ9 67 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 DCAF12Q5T6F0 453 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 GRTP1Q5TC63 336 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 TMEM164Q5U3C3 297 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 KMT5CQ86Y97 462 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 RASGRP3Q8IV61 690 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SYTL1Q8IYJ3 562 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 D2HGDHQ8N465 521 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 C19orf47Q8N9M1 422 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 MIPEPQ99797 713 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 DDA1Q9BW61 102 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 ACAT2Q9BWD1 397 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 TWSG1Q9GZX9 223 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 UTP6Q9NYH9 597 aaKnown RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-222ENST00000478095 LNPEPQ9UIQ6 1025 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 PDE10AQ9Y233 779 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 PCDHGA7Q9Y5G6 932 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 IGF2RP11717 2491 aa9.91□□□□□ -0.82
HDAC6-222ENST00000478095 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 KNTC1P50748 2209 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 A0A1W2PPV9 198 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SRRM3A6NNA2 597 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 POC1B-GALNT4F8VUJ3 575 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 CDC7O00311 574 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 TIAF1O95411 115 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 C8GP07360 202 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 ERGP11308 486 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 MAGP20916 626 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 IMPA1P29218 277 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 OAS2P29728 719 aaKnown RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 EIF2S3P41091 472 aaKnown RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 PNLIPRP1P54315 467 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 YBX1P67809 324 aaKnown RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 TGIF1Q15583 401 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 ZKSCAN8Q15776 578 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 CYP2A13Q16696 494 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SLC5A12Q1EHB4 618 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 TMTC4Q5T4D3 741 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 MROH9Q5TGP6 573 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 CEACAM20Q6UY09 585 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 CDHR3Q6ZTQ4 885 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 RAPH1Q70E73 1250 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 CARFQ8N187 725 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 NKAPQ8N5F7 415 aaKnown RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 FBXO15Q8NCQ5 510 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-222ENST00000478095 ZNF248Q8NDW4 579 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 HMGCLL1Q8TB92 370 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 MCOLN3Q8TDD5 553 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 ZNF480Q8WV37 535 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 KCNE4Q8WWG9 221 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SMPDL3AQ92484 453 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SLC22A18Q96BI1 424 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 TSPAN17Q96FV3 270 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SLC12A9Q9BXP2 914 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 FUT8Q9BYC5 575 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 PARVBQ9HBI1 364 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 POPDC3Q9HBV1 291 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 SYTL2Q9HCH5 934 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 FAM60AQ9NP50 221 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 PDE7BQ9NP56 450 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 FBXO8Q9NRD0 319 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 FGF21Q9NSA1 209 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 TAC3Q9UHF0 121 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 BTRCQ9Y297 605 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
HDAC6-222ENST00000478095 UNC13CQ8NB66 2214 aa9.9□□□□□ -0.83
HDAC6-222ENST00000478095 ACACBO00763 2458 aa9.9□□□□□ -0.83
HDAC6-222ENST00000478095 A0A087WUV0 522 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TEX51A0A1B0GUA7 166 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HMX2A2RU54 273 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PABPN1LA6NDY0 278 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms