RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 MYOGP15173 224 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 RPL35AP18077 110 aaKnown RBP0.64□□□□□ -2.31
CALD1-218ENST00000478075 HIST1H2ADP20671 130 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 GPX3P22352 226 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 ERVPABLB-1P60509 514 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 TFAP4Q01664 338 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 LRRC63Q05C16 580 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 DMPKQ09013 629 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 KIR2DS1Q14954 304 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 HERC3Q15034 1050 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 LRIF1Q5T3J3 769 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 LEMD1Q68G75 181 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 HIST3H2AQ7L7L0 130 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 ENAHQ8N8S7 591 aaPredicted RBP0.64□□□□□ -2.31
CALD1-218ENST00000478075 OR13J1Q8NGT2 312 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 ITLN1Q8WWA0 313 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 SGCDQ92629 289 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 TBX15Q96SF7 602 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 HNRNPABQ99729 332 aaKnown RBP0.64□□□□□ -2.31
CALD1-218ENST00000478075 NYXQ9GZU5 481 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 RANGRFQ9HD47 186 aaPredicted RBP0.64□□□□□ -2.31
CALD1-218ENST00000478075 CNOT8Q9UFF9 292 aaKnown RBP0.64□□□□□ -2.31
CALD1-218ENST00000478075 LYVE1Q9Y5Y7 322 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 COL1A2P08123 1366 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 PRSS51A0A1B0GVH4 220 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 EIF3CLB5ME19 914 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 TNFSF11O14788 317 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 TSPAN4O14817 238 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 TEX28O15482 410 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 KRT33AO76009 404 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 MT-ND1P03886 318 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 ODC1P11926 461 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 AOC1P19801 751 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 MSH2P43246 934 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 F2RL1P55085 397 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 NDUFV3P56181 108 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 ACY1Q03154 408 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 NEXNQ0ZGT2 675 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 ITGA7Q13683 1181 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 C9orf129Q5T035 196 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 GARNL3Q5VVW2 1013 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 ASPHD2Q6ICH7 369 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 UGT3A1Q6NUS8 523 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 MYLK4Q86YV6 388 aaPredicted RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 RNF175Q8N4F7 328 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 ZNF525Q8N782 197 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 AVL9Q8NBF6 648 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 PCYOX1LQ8NBM8 494 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 KIF1BPQ96EK5 621 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 SGF29Q96ES7 293 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 MMABQ96EY8 250 aaPredicted RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 C8orf48Q96LL4 319 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 FAM81BQ96LP2 452 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 LPAR4Q99677 370 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 BARD1Q99728 777 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 URM1Q9BTM9 101 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 MAK16Q9BXY0 300 aaKnown RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 CUTCQ9NTM9 273 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 C19orf25Q9UFG5 118 aaPredicted RBP0.63□□□□□ -2.31
CALD1-218ENST00000478075 CAPN7Q9Y6W3 813 aa0.63□□□□□ -2.31
CALD1-218ENST00000478075 TENM3Q9P273 2699 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 C2orf81A6NN90 581 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 PDHXO00330 501 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 NDUFS4O43181 175 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 TXNL1O43396 289 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 DFNA5O60443 496 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 VENTXO95231 258 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 APBB3O95704 486 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 ACADLP28330 430 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 CTCFP49711 727 aaPredicted RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 MEOX2P50222 304 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 GPR143P51810 404 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 NDST2P52849 883 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 EIF3BP55884 814 aaKnown RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 ERVK-16P61578 105 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 TOGARAM2Q6ZUX3 1019 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 CNTROBQ8N137 903 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 OR52B6Q8NGF0 335 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 OR4Q3Q8NH05 313 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 FRAT1Q92837 279 aaPredicted RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 ELSPBP1Q96BH3 223 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 SAAL1Q96ER3 474 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 DACH2Q96NX9 599 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 NUDCD1Q96RS6 583 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 DEFB126Q9BYW3 111 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 LRRCC1Q9C099 1032 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 PATZ1Q9HBE1 687 aaKnown RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 SARDHQ9UL12 918 aa0.62□□□□□ -2.31
CALD1-218ENST00000478075 ZFP37Q9Y6Q3 630 aaPredicted RBP0.62□□□□□ -2.31
CALD1-218ENST00000478075 KIF26AQ9ULI4 1882 aaPredicted RBP0.61□□□□□ -2.31
CALD1-218ENST00000478075 IGKV2-28A0A075B6P5 120 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 IGKV1D-17A0A075B6S4 117 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 IGHV3-20A0A0C4DH32 117 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 ENO4A6NNW6 628 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 ARHGEF33A8MVX0 844 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 HCRTR2O43614 444 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 PAGE4O60829 102 aa0.61□□□□□ -2.31
CALD1-218ENST00000478075 IGKV2D-28P01615 120 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms