RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TFAP2BQ92481 460 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 SLC22A18Q96BI1 424 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 COL20A1Q9P218 1284 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 RPS14P62263 151 aaKnown RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 RPL19P84098 196 aaKnown RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 CRHR2Q13324 411 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 MBLAC2Q68D91 279 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 FAM156AQ8NDB6 213 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 CCDC120Q96HB5 630 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 A0A0J9YVX5 310 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 OR2AT4A6NND4 320 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 TBX18O95935 607 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 DNASE1L3Q13609 305 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 MLIPQ5VWP3 458 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 THOC7Q6I9Y2 204 aaKnown RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 SVOPLQ8N434 492 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PROKR2Q8NFJ6 384 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PCDH7O60245 1069 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PCDHGA12O60330 932 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 ITIH1P19827 911 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 CDKN1CP49918 316 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 TPGS2Q68CL5 300 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 TMEM214Q6NUQ4 689 aaKnown RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 GPR153Q6NV75 609 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 FAM13CQ8NE31 585 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 ARHGAP9Q9BRR9 750 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 C3P01024 1663 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 A0A0G2JLL6 359 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 ZNF878C9JN71 531 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 KHNYNO15037 678 aaKnown RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 TBX1O43435 398 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 CA12O43570 354 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 SLC29A4Q7RTT9 530 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PRRT2Q7Z6L0 340 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 OR8H3Q8N146 312 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 Q8N9G6 341 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 CENPNQ96H22 339 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 SAGE2PA6NJ88 616 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 SPIN3Q5JUX0 258 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 ZNF676Q8N7Q3 588 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PLA2G15Q8NCC3 412 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 LENG8Q96PV6 779 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 DUSP26Q9BV47 211 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 SUV39H2Q9H5I1 410 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 GRHL1Q9NZI5 618 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 ZNF282Q9UDV7 671 aaPredicted RBP18.19■□□□□ 0.5
VARS2-209ENST00000477288 BCL9LQ86UU0 1499 aa18.19■□□□□ 0.5
VARS2-209ENST00000477288 PGLSO95336 258 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 STATHP02808 62 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 PSKH1P11801 424 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 RPS24P62847 133 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 TLE2Q04725 743 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 GPR68Q15743 365 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SDR16C5Q8N3Y7 309 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 RASGEF1CQ8N431 466 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 CNTD1Q8N815 330 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 LDAHQ9H6V9 325 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SMURF1Q9HCE7 757 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 GKN1Q9NS71 199 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 CLCN4P51793 760 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 CRISP3P54108 245 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 RNF220Q5VTB9 566 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 FOXRED2Q8IWF2 684 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SPOCK2Q92563 424 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SHDQ96IW2 340 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 UCKL1Q9NWZ5 548 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 PDE10AQ9Y233 779 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 RPLP0P05388 317 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 FMO3P31513 532 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SLC1A2P43004 574 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 MAGEA12P43365 314 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 ADAM17P78536 824 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 ZNF527Q8NB42 609 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 METTL8Q9H825 291 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 SEC61A2Q9H9S3 476 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 RC3H2Q9HBD1 1191 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 PEX16Q9Y5Y5 336 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 CFAP20Q9Y6A4 193 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 SLIT3O75094 1523 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 C2CD4BA6NLJ0 364 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 H3BSH0 61 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 TOR1BO14657 336 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 NDUFS4O43181 175 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 TRAPPC6AO75865 159 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 ALPIP09923 528 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 SCARB2Q14108 478 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 UNC93B1Q9H1C4 597 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 ASB3Q9Y575 518 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 TTC24A2A3L6 582 aaPredicted RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 TSPAN4O14817 238 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 GBX2P52951 348 aaPredicted RBP18.18■□□□□ 0.5
VARS2-209ENST00000477288 DCDC1P59894 354 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 TNFRSF25Q93038 417 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 C8orf48Q96LL4 319 aa18.18■□□□□ 0.5
VARS2-209ENST00000477288 NDC1Q9BTX1 674 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms