RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 FAM20CQ8IXL6 584 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 LMNTD2Q8IXW0 634 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
GMDS-204ENST00000476972 OR2L8Q8NGY9 312 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 CALML6Q8TD86 181 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 TCTN2Q96GX1 697 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 FOPNLQ96NB1 174 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 FAM167BQ9BTA0 163 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 RAB11FIP5Q9BXF6 653 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 ACTL8Q9H568 366 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 SLC39A10Q9ULF5 831 aa18.37■□□□□ 0.53
GMDS-204ENST00000476972 TEX15Q9BXT5 2789 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 TTI1O43156 1089 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 HCRTR1O43613 425 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 DNAJB5O75953 348 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 SPTBP11277 2137 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 CYP2A7P20853 494 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 CLCN7P51798 805 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 ITGA1P56199 1179 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 MORF4L2Q15014 288 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 BBS9Q3SYG4 887 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 HSP90AA5PQ58FG0 334 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 ZNF549Q6P9A3 640 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 APLFQ8IW19 511 aaPredicted RBP18.36■□□□□ 0.53
GMDS-204ENST00000476972 GIMAP7Q8NHV1 300 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 RAD51AP1Q96B01 352 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 LRFN5Q96NI6 719 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 SLC30A3Q99726 388 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 EBNA1BP2Q99848 306 aaKnown RBP18.36■□□□□ 0.53
GMDS-204ENST00000476972 TRIM55Q9BYV6 548 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 CHRNA10Q9GZZ6 450 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 CCDC68Q9H2F9 335 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 IARS2Q9NSE4 1012 aaKnown RBP18.36■□□□□ 0.53
GMDS-204ENST00000476972 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 MED16Q9Y2X0 877 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 MRFAP1Q9Y605 127 aa18.36■□□□□ 0.53
GMDS-204ENST00000476972 MATN4O95460 622 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 TTC4O95801 387 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 MAGP20916 626 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 RORAP35398 523 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 CCNFP41002 786 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 GABRA4P48169 554 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 KLHL38Q2WGJ6 581 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 IGDCC3Q8IVU1 814 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 SPNS2Q8IVW8 549 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 DSELQ8IZU8 1212 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 DENND1AQ8TEH3 1009 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 N4BP2L2Q92802 583 aaPredicted RBP18.35■□□□□ 0.53
GMDS-204ENST00000476972 KCNJ9Q92806 393 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 MR1Q95460 341 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 CLIP3Q96DZ5 547 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 PWWP2AQ96N64 755 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 NAT9Q9BTE0 207 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 GPR87Q9BY21 358 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 ACTR5Q9H9F9 607 aaPredicted RBP18.35■□□□□ 0.53
GMDS-204ENST00000476972 RNF14Q9UBS8 474 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 SERTAD3Q9UJW9 196 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 KLHL20Q9Y2M5 609 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 NOTCH2Q04721 2471 aa18.35■□□□□ 0.53
GMDS-204ENST00000476972 BLACEA4D250 179 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 ARHGEF33A8MVX0 844 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 E7EQ34 232 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 ERVK-10P10266 1014 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 PTPN4P29074 926 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 ITGA8P53708 1063 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 RPS18P62269 152 aaKnown RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 CUL1Q13616 776 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 TTLL9Q3SXZ7 439 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 SPANXN3Q5MJ09 141 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 HIBCHQ6NVY1 386 aaPredicted RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 ZNF517Q6ZMY9 492 aaPredicted RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 RAB42Q8N4Z0 105 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 C2CD4AQ8NCU7 369 aaPredicted RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 SLC22A18Q96BI1 424 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 KRT12Q99456 494 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 WDR83Q9BRX9 315 aaKnown RBP18.34■□□□□ 0.53
GMDS-204ENST00000476972 TRIM31Q9BZY9 425 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 CHST8Q9H2A9 424 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 PCMTD2Q9NV79 361 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 SPATA7Q9P0W8 599 aa18.34■□□□□ 0.53
GMDS-204ENST00000476972 SPTAN1Q13813 2472 aaKnown RBP18.33■□□□□ 0.53
GMDS-204ENST00000476972 TTLL8A6PVC2 850 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 H3BMH7 237 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 MEN1O00255 615 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 ZNF749O43361 778 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.52
GMDS-204ENST00000476972 HAUS5O94927 633 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 KLK3P07288 261 aaPredicted RBP18.33■□□□□ 0.52
GMDS-204ENST00000476972 PSMB5P28074 263 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 RPS15P62841 145 aaKnown RBP18.33■□□□□ 0.52
GMDS-204ENST00000476972 UGT8Q16880 541 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 HP1BP3Q5SSJ5 553 aaPredicted RBP18.33■□□□□ 0.52
GMDS-204ENST00000476972 LCN10Q6JVE6 187 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 SYTL1Q8IYJ3 562 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 GPR135Q8IZ08 494 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 PDIK1LQ8N165 341 aa18.33■□□□□ 0.52
GMDS-204ENST00000476972 DNAJC22Q8N4W6 341 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms