RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CD1DP15813 335 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 IMPA1P29218 277 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 RBMS1P29558 406 aaKnown RBP28.54■■■□□ 2.16
HOXB3-208ENST00000476342 CSRP3P50461 194 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 HSD11B2P80365 405 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 FASTKQ14296 549 aaKnown RBP28.54■■■□□ 2.16
HOXB3-208ENST00000476342 TSNQ15631 228 aaKnown RBP28.54■■■□□ 2.16
HOXB3-208ENST00000476342 SPATA6LQ8N4H0 392 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 FLVCR1-AS1Q8TAF5 88 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 GATA6Q92908 595 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 PPM1MQ96MI6 270 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 NMRAL1Q9HBL8 299 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 SOHLH2Q9NX45 425 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 STOX2Q9P2F5 926 aaPredicted RBP28.54■■■□□ 2.16
HOXB3-208ENST00000476342 IKZF3Q9UKT9 509 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 AKAP13Q12802 2813 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 PCM1Q15154 2024 aa28.54■■■□□ 2.16
HOXB3-208ENST00000476342 B4E171 279 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 ITIH1P19827 911 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 TSPAN7P41732 249 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 TSTA3Q13630 321 aaPredicted RBP28.53■■■□□ 2.16
HOXB3-208ENST00000476342 PPP1R3AQ16821 1122 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 CYB5D1Q6P9G0 228 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 IGF2-ASQ6U949 168 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 ATL1Q8WXF7 558 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 UNKQ9C0B0 810 aaKnown RBP28.53■■■□□ 2.16
HOXB3-208ENST00000476342 OCIAD1Q9NX40 245 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 OARD1Q9Y530 152 aa28.53■■■□□ 2.16
HOXB3-208ENST00000476342 SNRNP200O75643 2136 aaKnown RBP28.53■■■□□ 2.16
HOXB3-208ENST00000476342 SLC9B1P1A6NJY1 282 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 E7ENX8 843 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 PRICKLE3O43900 615 aaPredicted RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 TNFSF15O95150 251 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 SHBGP04278 402 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 CCL4P13236 92 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 MAPK10P53779 464 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 TAP2Q03519 686 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 SF1Q15637 639 aaKnown RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 FAM83EQ2M2I3 478 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 MBOAT1Q6ZNC8 495 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 PRR11Q96HE9 360 aaPredicted RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 TRAPPC9Q96Q05 1148 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 UTP6Q9NYH9 597 aaKnown RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 BTRCQ9Y297 605 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 PCDHB11Q9Y5F2 797 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 ADAMTS20P59510 1910 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 A0A1W2PPV9 198 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 PMS2P1A4D2B8 440 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 DXOO77932 396 aaKnown RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 GUCA1CO95843 209 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 FGF3P11487 239 aaPredicted RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 ST6GAL1P15907 406 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 RPA3P35244 121 aaPredicted RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 MAGEA12P43365 314 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 RAB15P59190 212 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 CDKL1Q00532 357 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 TMTC4Q5T4D3 741 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 SUSD1Q6UWL2 747 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 TRIM73Q86UV7 250 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 D2HGDHQ8N465 521 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 MREGQ8N565 214 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 PPFIBP2Q8ND30 876 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 KIAA1191Q96A73 305 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 SLC46A1Q96NT5 459 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 VPS11Q9H270 941 aa28.52■■■□□ 2.16
HOXB3-208ENST00000476342 INTS7Q9NVH2 962 aaKnown RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 SIDT1Q9NXL6 827 aaKnown RBP28.52■■■□□ 2.16
HOXB3-208ENST00000476342 ASPMQ8IZT6 3477 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 BRINP1O60477 761 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 ANXA5P08758 320 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 NUDT17P0C025 328 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 TMEM164Q5U3C3 297 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 AGTRAPQ6RW13 159 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 BMPERQ8N8U9 685 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 C19orf47Q8N9M1 422 aaKnown RBP28.51■■■□□ 2.15
HOXB3-208ENST00000476342 FBXL8Q96CD0 374 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 PDE7BQ9NP56 450 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 CCDC177Q9NQR7 707 aaPredicted RBP28.51■■■□□ 2.15
HOXB3-208ENST00000476342 SLC39A1Q9NY26 324 aa28.51■■■□□ 2.15
HOXB3-208ENST00000476342 PVRP15151 417 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 CCND1P24385 295 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 PSMB5P28074 263 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 ETV5P41161 510 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 MC2RQ01718 297 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 ACY1Q03154 408 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 FOXM1Q08050 763 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 DLG1Q12959 904 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 KLC3Q6P597 504 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 TDRPQ86YL5 185 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 CENPLQ8N0S6 344 aaPredicted RBP28.5■■■□□ 2.15
HOXB3-208ENST00000476342 OR2A1Q8NGT9 310 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 STAG3L4Q8TBR4 150 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 KCTD4Q8WVF5 259 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 CABS1Q96KC9 395 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 TAAR9Q96RI9 348 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 EGFL8Q99944 293 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 TMEM121BQ9BXQ6 578 aaPredicted RBP28.5■■■□□ 2.15
HOXB3-208ENST00000476342 FBXO8Q9NRD0 319 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 THSD1Q9NS62 852 aa28.5■■■□□ 2.15
HOXB3-208ENST00000476342 IGSF5Q9NSI5 407 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms