RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CDKN2CP42773 168 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 CARD16Q5EG05 197 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZC3H12BQ5HYM0 836 aaKnown RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PAGE2BQ5JRK9 111 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 CPZQ66K79 652 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 RGMBQ6NW40 437 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 TRIM46Q7Z4K8 759 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 TSPAN33Q86UF1 283 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZDHHC21Q8IVQ6 265 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PLPP6Q8IY26 295 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PAF1Q8N7H5 531 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ULK4Q96C45 1275 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ATP13A3Q9H7F0 1226 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 AFF4Q9UHB7 1163 aaKnown RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHGB1Q9Y5G3 927 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHGA10Q9Y5H3 936 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 SLC22A1O15245 554 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 RECQL5O94762 991 aaPredicted RBP20.58■□□□□ 0.89
COL18A1-207ENST00000473212 LRATO95237 230 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 ITGAMP11215 1152 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 RGS4P49798 205 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 RPS3AP61247 264 aaKnown RBP20.58■□□□□ 0.89
COL18A1-207ENST00000473212 DGCR6Q14129 220 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 ARHGEF7Q14155 803 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 ACOX1Q15067 660 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 TMEM236Q5W0B7 351 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 APCDD1Q8J025 514 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 ITPKCQ96DU7 683 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 EGLN2Q96KS0 407 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 RHNO1Q9BSD3 238 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 SERHLQ9NQF3 203 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 LATS2Q9NRM7 1088 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 RNF186Q9NXI6 227 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 SH3BP1Q9Y3L3 701 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHB7Q9Y5E2 793 aa20.58■□□□□ 0.89
COL18A1-207ENST00000473212 ZNF7P17097 686 aaPredicted RBP20.58■□□□□ 0.88
COL18A1-207ENST00000473212 NFATC2Q13469 925 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 GTF2H3Q13889 308 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 INAQ16352 499 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 ARMC12Q5T9G4 340 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 SHQ1Q6PI26 577 aaKnown RBP20.58■□□□□ 0.88
COL18A1-207ENST00000473212 RFLNAQ6ZTI6 216 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 CEP68Q76N32 757 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 GALNT13Q8IUC8 556 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 MYO19Q96H55 970 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 TSSK3Q96PN8 268 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 ABCG2Q9UNQ0 655 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 PMF1-BGLAPU3KQ54 211 aa20.58■□□□□ 0.88
COL18A1-207ENST00000473212 M0QX08 132 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 PER2O15055 1255 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 DIRAS1O95057 198 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ZNF682O95780 498 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 EPORP19235 508 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 CLK3P49761 638 aaKnown RBP20.57■□□□□ 0.88
COL18A1-207ENST00000473212 MTA1Q13330 715 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 CHRNA6Q15825 494 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 SMU1Q2TAY7 513 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ZSWIM9Q86XI8 627 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 CHCHD4Q8N4Q1 142 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 PCSK9Q8NBP7 692 aaKnown RBP20.57■□□□□ 0.88
COL18A1-207ENST00000473212 S100ZQ8WXG8 99 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 MYOCQ99972 504 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ACPTQ9BZG2 426 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 TNKS2Q9H2K2 1166 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 WDR37Q9Y2I8 494 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 AP3M1Q9Y2T2 418 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ERN1O75460 977 aaKnown RBP20.57■□□□□ 0.88
COL18A1-207ENST00000473212 PARNO95453 639 aaKnown RBP20.57■□□□□ 0.88
COL18A1-207ENST00000473212 BMP4P12644 408 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 BPIP17213 487 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 PSMB9P28065 219 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 DAPP51397 102 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 DNASE1L3Q13609 305 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ADCK1Q86TW2 530 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 MFSD4AQ8N468 514 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 PYCR2Q96C36 320 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 YIPF6Q96EC8 236 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 CLEC4EQ9ULY5 219 aa20.57■□□□□ 0.88
COL18A1-207ENST00000473212 TBKBP1A7MCY6 615 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 MYO1GB0I1T2 1018 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 PGLSO95336 258 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 ACVR2AP27037 513 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 MASP1P48740 699 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 NCS1P62166 190 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 RPS14P62263 151 aaKnown RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 SLC35A2P78381 396 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 SMN1Q16637 294 aaKnown RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 DGUOKQ16854 277 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 CERS6Q6ZMG9 384 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 P2RY8Q86VZ1 359 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 CADM3Q8N126 398 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 TMEM132CQ8N3T6 1108 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 SETD9Q8NE22 299 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 REXO5Q96IC2 774 aaKnown RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 VN1R3Q9BXE9 311 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 KCNH6Q9H252 994 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 ZFYVE1Q9HBF4 777 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 PARVBQ9HBI1 364 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 NMRK2Q9NPI5 230 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms