RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 UAP1L1Q3KQV9 507 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ATP6AP1LQ52LC2 224 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 C6orf136Q5SQH8 315 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TPRG1LQ5T0D9 272 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 PRAMEF9Q5VWM5 478 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 GRHL2Q6ISB3 625 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ENPP7Q6UWV6 458 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 Q6ZSR9 355 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 SNX32Q86XE0 403 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 MYLK4Q86YV6 388 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 SYTL1Q8IYJ3 562 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TBC1D21Q8IYX1 336 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 RAB42Q8N4Z0 105 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 PPFIBP2Q8ND30 876 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 RBM15BQ8NDT2 890 aaKnown RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 HMGCLL1Q8TB92 370 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 OR1E3Q8WZA6 343 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 BIRC7Q96CA5 298 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 WDR34Q96EX3 536 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 PPP3R2Q96LZ3 170 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 RTKNQ9BST9 563 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 GPR174Q9BXC1 333 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TPSD1Q9BZJ3 242 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 BRINP2Q9C0B6 783 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 MMADHCQ9H3L0 296 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 OSGEPL1Q9H4B0 414 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ELOVL6Q9H5J4 265 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 EBF2Q9HAK2 575 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 SDR39U1Q9NRG7 319 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 ASIC5Q9NY37 505 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 TAS2R1Q9NYW7 299 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 GIMAP2Q9UG22 337 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 CIDEBQ9UHD4 219 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 MOSPD1Q9UJG1 213 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 ZNF490Q9ULM2 529 aaPredicted RBP9.1□□□□□ -0.95
VPS52-216ENST00000471309 KCNK6Q9Y257 313 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 WDR37Q9Y2I8 494 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 GPSM3Q9Y4H4 160 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 KCNE2Q9Y6J6 123 aa9.1□□□□□ -0.95
VPS52-216ENST00000471309 DOCK9Q9BZ29 2069 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 A0A1W2PPC4 97 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 MEI4A8MW99 385 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 E7EQ34 232 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 H0YIV9 168 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 FFAR3O14843 346 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 GSC2O15499 205 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 GPR42O15529 346 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PI15O43692 258 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PEX11AO75192 247 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 KRT16P08779 473 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 GPX3P22352 226 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PRPH2P23942 346 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 RPL10P27635 214 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 CPOXP36551 454 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 HALP42357 657 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 MAGEA9P43362 315 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 MXRA7P84157 204 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 EMX2Q04743 252 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 CSTF3Q12996 717 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 MAD2L1Q13257 205 aaPredicted RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 CUL3Q13618 768 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 NR6A1Q15406 480 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 ZRSR2Q15696 482 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 CPSF6Q16630 551 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS52-216ENST00000471309 CYP2A13Q16696 494 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 ALG11Q2TAA5 492 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 KIF19Q2TAC6 998 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PDCD4Q53EL6 469 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 XKR6Q5GH73 641 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PRAMEF14Q5SWL7 426 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 C10orf62Q5T681 223 aaPredicted RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 PRAMEF13Q5VWM6 474 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 FRG2Q64ET8 278 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SCIMPQ6UWF3 145 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 WASH2PQ6VEQ5 465 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 Q6ZSR6 202 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 LPCAT2Q7L5N7 544 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SLC22A18ASQ8N1D0 253 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 ARHGAP24Q8N264 748 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 MIER2Q8N344 545 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SFRP1Q8N474 314 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PHC3Q8NDX5 983 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SETD7Q8WTS6 366 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 UTP4Q969X6 686 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 C12orf66Q96MD2 445 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 FRG2BQ96QU4 278 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 ORAI3Q9BRQ5 295 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 MENTQ9BUN1 341 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SLC25A23Q9BV35 468 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 RAB11FIP5Q9BXF6 653 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 CADM1Q9BY67 442 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms