RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ROPN1BQ9BZX4 212 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 LHPPQ9H008 270 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ROPN1Q9HAT0 212 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 TXLNGQ9NUQ3 528 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 IMP3Q9NV31 184 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 INTS9Q9NV88 658 aaKnown RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ETNK2Q9NVF9 386 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 NFKBIL1Q9UBC1 381 aaPredicted RBP8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ACSL5Q9ULC5 683 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 PSMD13Q9UNM6 376 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 CSAG2Q9Y5P2 127 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 HEBP2Q9Y5Z4 205 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
SYNGAP1-205ENST00000470232 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 SPG11Q96JI7 2443 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC88CQ9P219 2028 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 FAM221AA4D161 298 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 GSAPA4D1B5 854 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 KLHL33A6NCF5 533 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 VGLL3A8MV65 326 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 PROSCO94903 275 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CLDN14O95500 239 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 GAS8O95995 478 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CRYABP02511 175 aaKnown RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 DRD2P14416 443 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 HLA-DPA1P20036 260 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCNCP24863 283 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ATP5DP30049 168 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 PCK1P35558 622 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 GJC1P36383 396 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CETN2P41208 172 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CA7P43166 264 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLCO1A2P46721 670 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 IFI35P80217 286 aaPredicted RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CAV1Q03135 178 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF324BQ6AW86 544 aaPredicted RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 RHBDD2Q6NTF9 364 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ISLR2Q6UXK2 745 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 C11orf96Q7Z7L8 435 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 OR4E2Q8NGC2 313 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 DNAJB8Q8NHS0 232 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 MAML1Q92585 1016 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 FATE1Q969F0 183 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 SNF8Q96H20 258 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 C12orf66Q96MD2 445 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 CDC42EP4Q9H3Q1 356 aaKnown RBP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 KIR3DX1Q9H7L2 352 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 MAGEE1Q9HCI5 957 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 DTLQ9NZJ0 730 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLC24A2Q9UI40 661 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ANAPC5Q9UJX4 755 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 POMT2Q9UKY4 750 aa8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYNGAP1-205ENST00000470232 ANKRD12Q6UB98 2062 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 TRAV17A0A0B4J275 112 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 DYTNA2CJ06 578 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 TMEM191CA6NGB0 347 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 PSTPIP1O43586 416 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 PMPCBO75439 489 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 VIMP08670 466 aaKnown RBP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 CBSLP0DN79 551 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ITGAXP20702 1163 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 MMP11P24347 488 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 PRDX3P30048 256 aaKnown RBP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 CBSP35520 551 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 SSR1P43307 286 aaKnown RBP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 TDGF1P3P51864 188 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ART1P52961 327 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ITGA8P53708 1063 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ARG2P78540 354 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 GALNT3Q14435 633 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ITIH4Q14624 930 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZNF789Q5FWF6 425 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 LDLRAP1Q5SW96 308 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 UBAP2Q5T6F2 1119 aaKnown RBP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 C1orf189Q5VU69 101 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ZDHHC20Q5W0Z9 365 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 METRNLQ641Q3 311 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 PLEKHA7Q6IQ23 1121 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 TMEM220Q6QAJ8 160 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 PPP1R32Q7Z5V6 425 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 LRRC34Q8IZ02 419 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 BBOF1Q8ND07 529 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 CHDHQ8NE62 594 aaPredicted RBP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 ARRDC2Q8TBH0 407 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 DENND1AQ8TEH3 1009 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 DYDC1Q8WWB3 177 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 HSPH1Q92598 858 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 SLCO2A1Q92959 643 aa8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.59□□□□□ -1.03
SYNGAP1-205ENST00000470232 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms