RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 WISP2O76076 250 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 NDST3O95803 873 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 HLA-DPA1P20036 260 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
RPP40-204ENST00000468105 PREPP48147 710 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 ARL4CP56559 192 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 SOX8P57073 446 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 CDH17Q12864 832 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 BRD3Q15059 726 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 FNBP1LQ5T0N5 605 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 MLIPQ5VWP3 458 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 ZNF534Q76KX8 674 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 TRIM73Q86UV7 250 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 FJX1Q86VR8 437 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 PDIK1LQ8N165 341 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 SERPINB12Q96P63 405 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 GBP5Q96PP8 586 aa13.09□□□□□ -0.31
RPP40-204ENST00000468105 PTRH2Q9Y3E5 179 aaKnown RBP13.09□□□□□ -0.31
RPP40-204ENST00000468105 UQCRHLA0A096LP55 91 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 POLBP06746 335 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 UQCRHP07919 91 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 SNRPB2P08579 225 aaKnown RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 MYBL2P10244 700 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 CYP2A7P20853 494 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 CDH3P22223 829 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 HMGCLP35914 325 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 SSPNQ14714 243 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 SLC1A5Q15758 541 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 ZNF658BQ4V348 819 aaPredicted RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 TMTC4Q5T4D3 741 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 LYPLAL1Q5VWZ2 237 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 DENND5AQ6IQ26 1287 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 EMBQ6PCB8 327 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 CENPUQ71F23 418 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 CAND1Q86VP6 1230 aaKnown RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 RAB43Q86YS6 212 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 PHC3Q8NDX5 983 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 LRRC39Q96DD0 335 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 LURAP1Q96LR2 239 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 FICDQ9BVA6 458 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 XKR8Q9H6D3 395 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
RPP40-204ENST00000468105 DHCR7Q9UBM7 475 aaKnown RBP13.08□□□□□ -0.32
RPP40-204ENST00000468105 PCNX1Q96RV3 2341 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 MGAT4DA6NG13 374 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 KCNJ13O60928 360 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ERLIN1O75477 346 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 AGTP01019 485 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 STSP08842 583 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 MSL3P1P0C860 447 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 TPBGLP0DKB5 382 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 VCLP18206 1134 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 GRIA1P42261 906 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 NPY2RP49146 381 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 Q0VFX4 171 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 GTF2H3Q13889 308 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 SPARCL1Q14515 664 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 SLMAPQ14BN4 828 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 TESK1Q15569 626 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 DNAJC21Q5F1R6 531 aaKnown RBP13.07□□□□□ -0.32
RPP40-204ENST00000468105 SIRPB2Q5JXA9 342 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ADGRF3Q8IZF5 1079 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ZADH2Q8N4Q0 377 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 OR2L2Q8NH16 312 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
RPP40-204ENST00000468105 FAR1Q8WVX9 515 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ITLN2Q8WWU7 325 aaPredicted RBP13.07□□□□□ -0.32
RPP40-204ENST00000468105 CAVIN3Q969G5 261 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
RPP40-204ENST00000468105 SLX1AQ9BQ83 275 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 SLC6A20Q9NP91 592 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 RAD18Q9NS91 495 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 BFARQ9NZS9 450 aa13.07□□□□□ -0.32
RPP40-204ENST00000468105 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
RPP40-204ENST00000468105 GSAPA4D1B5 854 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 E7EQ34 232 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 KCNK10P57789 538 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 CDSNQ15517 529 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 ZNF324BQ6AW86 544 aaPredicted RBP13.06□□□□□ -0.32
RPP40-204ENST00000468105 CARFQ8N187 725 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 DTWD1Q8N5C7 304 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 SLC25A41Q8N5S1 370 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 DNAAF3Q8N9W5 541 aa13.06□□□□□ -0.32
RPP40-204ENST00000468105 OR2Y1Q8NGV0 311 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms