RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 XKR9Q5GH70 373 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 TRNP1Q6NT89 227 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 PLEKHM3Q6ZWE6 761 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 TMPRSS12Q86WS5 348 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 COMMD2Q86X83 199 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 FOXP4Q8IVH2 680 aaPredicted RBP3.92□□□□□ -1.78
SMC4-208ENST00000467468 PGBD5Q8N414 524 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 CPSF7Q8N684 471 aaKnown RBP3.92□□□□□ -1.78
SMC4-208ENST00000467468 BMPERQ8N8U9 685 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 AMER3Q8N944 861 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 L3MBTL4Q8NA19 623 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 TANKQ92844 425 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 TBC1D31Q96DN5 1066 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 STAMBPL1Q96FJ0 436 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 IGSF21Q96ID5 467 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 ADGRG7Q96K78 797 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 C3orf30Q96M34 536 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 MYADMQ96S97 322 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 RAD9AQ99638 391 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 C1QTNF4Q9BXJ3 329 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 VN1R1Q9GZP7 353 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 SRD5A3Q9H8P0 318 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 ACKR4Q9NPB9 350 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 SERINC1Q9NRX5 453 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 PNPLA3Q9NST1 481 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 TMEM161AQ9NX61 479 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 CYP39A1Q9NYL5 469 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 ZNF224Q9NZL3 707 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 B3GAT1Q9P2W7 334 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 SIX4Q9UIU6 781 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 STX8Q9UNK0 236 aa3.92□□□□□ -1.78
SMC4-208ENST00000467468 HEG1Q9ULI3 1381 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ZCWPW2A0A1B0GU75 182 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 C13orf42A0A1B0GVH6 325 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 A0A1W2PPW3 197 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 KBTBD13C9JR72 458 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 FLRT2O43155 660 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 TTI1O43156 1089 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 VEGFDO43915 354 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ATP6AP2O75787 350 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 AKAP3O75969 853 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 KDM4BO94953 1096 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PLGP00747 810 aaPredicted RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 C9P02748 559 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 LINC00271P0C7V0 271 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 C8orf89P0DMQ9 161 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CSF2RAP15509 400 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 GAP43P17677 238 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 GM2AP17900 193 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 TYMPP19971 482 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 IL10P22301 178 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 USP8P40818 1118 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CD86P42081 329 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PSMC4P43686 418 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CDX1P47902 265 aaPredicted RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 TRAF3Q13114 568 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PRKAA1Q13131 559 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 SNTA1Q13424 505 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 SGCBQ16585 318 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PTGISQ16647 500 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CTU2Q2VPK5 515 aaKnown RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 LACTB2Q53H82 288 aaPredicted RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.91□□□□□ -1.781e-13■■■■■ 65.9
SMC4-208ENST00000467468 CYB5D1Q6P9G0 228 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PRSS57Q6UWY2 283 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CATSPER4Q7RTX7 472 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ARHGAP22Q7Z5H3 698 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 EXOC3L1Q86VI1 746 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ARHGAP24Q8N264 748 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 RYBPQ8N488 228 aaPredicted RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 NCOA7Q8NI08 942 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 LMO3Q8TAP4 145 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 RNF128Q8TEB7 428 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 CCDC107Q8WV48 283 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 KLHL5Q96PQ7 755 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 TRIM7Q9C029 511 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 LSG1Q9H089 658 aaKnown RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 RNPEPL1Q9HAU8 725 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 GKN1Q9NS71 199 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ANO10Q9NW15 660 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 COMMD8Q9NX08 183 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 SMARCAL1Q9NZC9 954 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 SPG21Q9NZD8 308 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 TXNDC16Q9P2K2 825 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 EPS15L1Q9UBC2 864 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 ICAM5Q9UMF0 924 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 GPR132Q9UNW8 380 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 PDS5AQ29RF7 1337 aaKnown RBP3.91□□□□□ -1.78
SMC4-208ENST00000467468 PCDH11YQ9BZA8 1340 aa3.91□□□□□ -1.78
SMC4-208ENST00000467468 TRAV24A0A0B4J272 114 aa3.9□□□□□ -1.79
SMC4-208ENST00000467468 TEX13DA0A0J9YY54 714 aaPredicted RBP3.9□□□□□ -1.79
SMC4-208ENST00000467468 CCDC69A6NI79 296 aa3.9□□□□□ -1.79
SMC4-208ENST00000467468 ZNHIT1O43257 154 aa3.9□□□□□ -1.79
SMC4-208ENST00000467468 RNASEH1O60930 286 aaKnown RBP3.9□□□□□ -1.79
SMC4-208ENST00000467468 WDR1O75083 606 aa3.9□□□□□ -1.79
SMC4-208ENST00000467468 LDB3O75112 727 aa3.9□□□□□ -1.79
SMC4-208ENST00000467468 NME6O75414 186 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms