RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SORT1Q99523 831 aa15.47■□□□□ 0.07
SMC4-204ENST00000462787 ZDHHC6Q9H6R6 413 aa15.47■□□□□ 0.07
SMC4-204ENST00000462787 C14orf119Q9NWQ9 140 aa15.47■□□□□ 0.07
SMC4-204ENST00000462787 LCHNA4D1U4 455 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 INSIG1O15503 277 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 ENTPD6O75354 484 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 ATE1O95260 518 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 SLC35E2BP0CK96 405 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 SPAM1P38567 509 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 DIO3P55073 304 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 MARCH9Q86YJ5 346 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 MAPK15Q8TD08 544 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 TMEM80Q96HE8 168 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 CEP295NLQ96MC4 621 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 IL4I1Q96RQ9 567 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 RANBP9Q96S59 729 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 FIZ1Q96SL8 496 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.46■□□□□ 0.071e-147■■■■■ 345.5
SMC4-204ENST00000462787 PIGVQ9NUD9 493 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 STOX2Q9P2F5 926 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 GIMAP2Q9UG22 337 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 HLA-DPB1P04440 258 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 C8GP07360 202 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 ZNF806P0C7X5 589 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 RPL4P36578 427 aaKnown RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 HMGCS1Q01581 520 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 TARDBPQ13148 414 aaKnown RBP eCLIP15.46■□□□□ 0.073e-6■■■■□ 21.4
SMC4-204ENST00000462787 RPS27LQ71UM5 84 aaKnown RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 ZNF467Q7Z7K2 595 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 MAGEH1Q9H213 219 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 GOLGA2P5Q9HBQ8 144 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 PLCL2Q9UPR0 1127 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 OR51F1A6NGY5 319 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 MAP2K3P46734 347 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 SCARB2Q14108 478 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 HSD17B12Q53GQ0 312 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 SYPL2Q5VXT5 272 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 OXR1Q8N573 874 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 ZNF557Q8N988 423 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 LRCH3Q96II8 777 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 C3orf14Q9HBI5 128 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 SPG21Q9NZD8 308 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 UBQLN2Q9UHD9 624 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 FBXO9Q9UK97 447 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 WWP2O00308 870 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 KPNA3O00505 521 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 C1RP00736 705 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 LMO2P25791 158 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 NFKB2Q00653 900 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 ZBTB6Q15916 424 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 CILP2Q8IUL8 1156 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 XAGE5Q8WWM1 108 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 MAGIXQ9H6Y5 334 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 GPN2Q9H9Y4 310 aaPredicted RBP15.46■□□□□ 0.07
SMC4-204ENST00000462787 FZD4Q9ULV1 537 aa15.46■□□□□ 0.07
SMC4-204ENST00000462787 CHURC1-FNTBB4DL54 471 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 FAM47E-STBD1D6RA91 191 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 G3V2L1 256 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 ZNF24P17028 368 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 CPOXP36551 454 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 INCA1Q0VD86 236 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 OLIG2Q13516 323 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 FAM180AQ6UWF9 173 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 PIM3Q86V86 326 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 SERPINA9Q86WD7 417 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 CARM1Q86X55 608 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 YAF2Q8IY57 180 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 PM20D2Q8IYS1 436 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 KCTD13Q8WZ19 329 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 PSMG2Q969U7 264 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 MSANTD3Q96H12 275 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 KCNA7Q96RP8 456 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 MIR1-1HGQ9H1L0 117 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 AIG1Q9NVV5 245 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 TLR5O60602 858 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 OR7A10O76100 309 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
SMC4-204ENST00000462787 KCNJ8Q15842 424 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 MED27Q6P2C8 311 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 ADGRD2Q7Z7M1 963 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 ARL5AQ9Y689 179 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 TCRBV3S1A0A5B6 114 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 GRID2O43424 1007 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 SERPINA3P01011 423 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 TLX1P31314 330 aaPredicted RBP15.45■□□□□ 0.06
SMC4-204ENST00000462787 GUCA1AP43080 201 aaPredicted RBP15.45■□□□□ 0.06
SMC4-204ENST00000462787 LILRA4P59901 499 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 NCS1P62166 190 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 C6orf136Q5SQH8 315 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 ZNF433Q8N7K0 673 aaPredicted RBP15.45■□□□□ 0.06
SMC4-204ENST00000462787 TP63Q9H3D4 680 aaPredicted RBP15.45■□□□□ 0.06
SMC4-204ENST00000462787 CD93Q9NPY3 652 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 TBC1D24Q9ULP9 559 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 L7N2F9 121 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 TBL1XO60907 577 aa15.45■□□□□ 0.06
SMC4-204ENST00000462787 CNTN5O94779 1100 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms