RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 U3KQA8 63 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 ADGRG4Q8IZF6 3080 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 OTOGQ6ZRI0 2925 aa4.86□□□□□ -1.63
COPS3-204ENST00000462236 FER1L5A0AVI2 2057 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 ANKRD12Q6UB98 2062 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 GOLGA6L10A0A0M3HER8 536 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 C2CD4BA6NLJ0 364 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 HHLA1C9JL84 531 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 CLDN5O00501 218 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 KLK10O43240 276 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 TBX18O95935 607 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 KLKB1P03952 638 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 POLBP06746 335 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 ACADMP11310 421 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 ATP5F1P24539 256 aaPredicted RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 GJC1P36383 396 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 CDH8P55286 799 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 RPS14P62263 151 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 YPEL5P62699 121 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 TFAMQ00059 246 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 CEP78Q5JTW2 689 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 RETSATQ6NUM9 610 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 CPXM2Q8N436 756 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 EID2Q8N6I1 236 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 PAF1Q8N7H5 531 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 OR5B17Q8NGF7 314 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 NOC3LQ8WTT2 800 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 UCMAQ8WVF2 138 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 POMGNT1Q8WZA1 660 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 KCNJ9Q92806 393 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 FAM131CQ96AQ9 280 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 NAF1Q96HR8 494 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 VCPIP1Q96JH7 1222 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 ADAD1Q96M93 576 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 FRG2BQ96QU4 278 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 KCNK16Q96T55 309 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 MRPL45Q9BRJ2 306 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 TUBB6Q9BUF5 446 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 HDHD5Q9BXW7 423 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 GPR63Q9BZJ6 419 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 DPEP3Q9H4B8 488 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 CSNK1G1Q9HCP0 422 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 MLXIPLQ9NP71 852 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 PAPOLBQ9NRJ5 636 aaKnown RBP4.85□□□□□ -1.63
COPS3-204ENST00000462236 TMEM248Q9NWD8 314 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 PLK2Q9NYY3 685 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 CRYL1Q9Y2S2 319 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 ANKRD36A6QL64 1941 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 SPTBP11277 2137 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 MYO7BQ6PIF6 2116 aa4.85□□□□□ -1.63
COPS3-204ENST00000462236 SLC22A23A1A5C7 686 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 LATO43561 262 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 TIMM44O43615 452 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 CNOT3O75175 753 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 BEST1O76090 585 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 CELA2AP08217 269 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 IRF1P10914 325 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 CNTFP26441 200 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 EPHB2P29323 1055 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 GNL1P36915 607 aaPredicted RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 CCR10P46092 362 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 GALCP54803 685 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 NANOS3P60323 173 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 RHAGQ02094 409 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 TRIM29Q14134 588 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 E2F5Q15329 346 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 BAK1Q16611 211 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 SLC30A9Q6PML9 568 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 KDM7AQ6ZMT4 941 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 GPBP1Q86WP2 473 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 ZC3H3Q8IXZ2 948 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 ESX1Q8N693 406 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 SORCS1Q8WY21 1168 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 SAAL1Q96ER3 474 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 HPDLQ96IR7 371 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 LMLNQ96KR4 655 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 PLIN2Q99541 437 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 FAM213AQ9BRX8 229 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.84□□□□□ -1.63
COPS3-204ENST00000462236 NPLQ9BXD5 320 aaPredicted RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 CADM1Q9BY67 442 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 SLC2A11Q9BYW1 496 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 PRSS22Q9GZN4 317 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 STN1Q9H668 368 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 MOV10Q9HCE1 1003 aaKnown RBP4.84□□□□□ -1.63
COPS3-204ENST00000462236 PRSS16Q9NQE7 514 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 GDF3Q9NR23 364 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
COPS3-204ENST00000462236 SCML2Q9UQR0 700 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 ZNF510Q9Y2H8 683 aa4.84□□□□□ -1.63
COPS3-204ENST00000462236 CACNA1CQ13936 2221 aa4.84□□□□□ -1.64
COPS3-204ENST00000462236 PDZD2O15018 2839 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 DOCK10Q96BY6 2186 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 FRMD3A2A2Y4 597 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 DPPA5A6NC42 116 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 TLR4O00206 839 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms