RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CHD6Q8TD26 2715 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 DMXL2Q8TDJ6 3036 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 CCDC151A5D8V7 595 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 ISM1B1AKI9 464 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 CDC7O00311 574 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 RASSF9O75901 435 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 SLC16A8O95907 504 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 CSTF2P33240 577 aaKnown RBP eCLIP21.71■■□□□ 1.071e-6■■□□□ 12.7
C9orf3-209ENST00000460573 KPNA2P52292 529 aaKnown RBP21.71■■□□□ 1.07
C9orf3-209ENST00000460573 PNLIPRP1P54315 467 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 GABREP78334 506 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 CDKL1Q00532 357 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 PHKG1Q16816 387 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 FAM83EQ2M2I3 478 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 FBXO38Q6PIJ6 1188 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 SPESP1Q6UW49 350 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 FAM92BQ6ZTR7 304 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 LSMEM2Q8N112 164 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 ATL1Q8WXF7 558 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 FGF11Q92914 225 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 MAP3K3Q99759 626 aa21.71■■□□□ 1.07
C9orf3-209ENST00000460573 ROPN1BQ9BZX4 212 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-209ENST00000460573 ZNF768Q9H5H4 540 aaKnown RBP21.71■■□□□ 1.07
C9orf3-209ENST00000460573 ROPN1Q9HAT0 212 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-209ENST00000460573 A0A087WV48 116 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 NPEPPSL1A6NEC2 478 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 A8MU76 341 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 CDH16O75309 829 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 COL6A2P12110 1019 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 CDH3P22223 829 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 OAS2P29728 719 aaKnown RBP21.7■■□□□ 1.06
C9orf3-209ENST00000460573 PPP1CAP62136 330 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 IFFO1Q0D2I5 559 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 PPP1R3AQ16821 1122 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 SLC5A12Q1EHB4 618 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 RAB11FIP2Q7L804 512 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 SYTL1Q8IYJ3 562 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 RCBTB1Q8NDN9 531 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 ZNF480Q8WV37 535 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 KLHL6Q8WZ60 621 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 KIAA1191Q96A73 305 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 OR2A14Q96R47 310 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 PITPNM3Q9BZ71 974 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 ARL15Q9NXU5 204 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 SPHK1Q9NYA1 384 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 IKZF3Q9UKT9 509 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 OARD1Q9Y530 152 aa21.7■■□□□ 1.06
C9orf3-209ENST00000460573 CTIFO43310 598 aaKnown RBP21.69■■□□□ 1.06
C9orf3-209ENST00000460573 KIF1CO43896 1103 aaKnown RBP21.69■■□□□ 1.06
C9orf3-209ENST00000460573 KLHL2O95198 593 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 UGT2B7P16662 529 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 IMPA1P29218 277 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 TSNQ15631 228 aaKnown RBP21.69■■□□□ 1.06
C9orf3-209ENST00000460573 CDKL4Q5MAI5 379 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 KLC3Q6P597 504 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 FRA10AC1Q70Z53 315 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 RIBC1Q8N443 379 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-209ENST00000460573 SPATA6LQ8N4H0 392 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 STAG3L4Q8TBR4 150 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 SLC41A2Q96JW4 573 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 VPS11Q9H270 941 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 IGSF5Q9NSI5 407 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 STOX2Q9P2F5 926 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-209ENST00000460573 LOXL2Q9Y4K0 774 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 FREM2Q5SZK8 3169 aa21.69■■□□□ 1.06
C9orf3-209ENST00000460573 A0A0J9YY10 115 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 KRT87PA6NCN2 255 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 E7ENX8 843 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 PLD2O14939 933 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 MAP3K7O43318 606 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 TLX3O43711 291 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 PRICKLE3O43900 615 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 ZBTB11O95625 1053 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 ANXA5P08758 320 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 CCND1P24385 295 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 PEBP1P30086 187 aaKnown RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 EIF2S3P41091 472 aaKnown RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 LSSP48449 732 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 TAP2Q03519 686 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 C16orf72Q14CZ0 275 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 ACAP2Q15057 778 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 TBC1D25Q3MII6 688 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 C3orf38Q5JPI3 329 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 CYB5D1Q6P9G0 228 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 FOXR1Q6PIV2 292 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 CENPLQ8N0S6 344 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-209ENST00000460573 FBXO39Q8N4B4 442 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 FLVCR1-AS1Q8TAF5 88 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 RHEBL1Q8TAI7 183 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 ACMSDQ8TDX5 336 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 FBXL8Q96CD0 374 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 POLR1BQ9H9Y6 1135 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 TBK1Q9UHD2 729 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 PCDHB11Q9Y5F2 797 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 PCDHGA8Q9Y5G5 932 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 ZFHX4Q86UP3 3567 aa21.68■■□□□ 1.06
C9orf3-209ENST00000460573 CACNA1GO43497 2377 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 IGHV5-51A0A0C4DH38 117 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 RFPL1O75677 317 aa21.67■■□□□ 1.06
C9orf3-209ENST00000460573 NELFEP18615 380 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms