RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FOXB2Q5VYV0 432 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MAP1SQ66K74 1059 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 NANOGP8Q6NSW7 305 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 FAM117BQ6P1L5 589 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 TATDN1Q6P1N9 297 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 DOK6Q6PKX4 331 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MOB2Q70IA6 237 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SPRED1Q7Z699 444 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 CAND1Q86VP6 1230 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 CARNMT1Q8N4J0 409 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 TOP6BLQ8N6T0 577 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 OR6J1Q8NGC5 347 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 PIGXQ8TBF5 258 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 S100PBPQ96BU1 408 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ATG4CQ96DT6 458 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF512Q96ME7 567 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SCGB3A2Q96PL1 93 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 TSSK3Q96PN8 268 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SLC29A1Q99808 456 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 WACQ9BTA9 647 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MROH8Q9H579 483 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 NANOGQ9H9S0 305 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF358Q9NW07 568 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 THG1LQ9NWX6 298 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SEC14L3Q9UDX4 400 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 H7C4K7 107 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SULT1C2O00338 296 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 WNT9AO14904 365 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PCDHGA12O60330 932 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NME6O75414 186 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SULT1C4O75897 302 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 OR4F21O95013 312 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ALDOAP04075 364 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RLN2P04090 185 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CSF2P04141 144 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 IL3P08700 152 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ITGB6P18564 788 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CHMP24386 653 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CRHBPP24387 322 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 YWHAQP27348 245 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CLCN3P51790 818 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 XKP51811 444 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SMSP52788 366 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TAS2R41P59536 307 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ST8SIA6P61647 398 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CD47Q08722 323 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ST3GAL4Q11206 333 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MTAPQ13126 283 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CPSF6Q16630 551 aaKnown RBP eCLIP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PYHIN1Q6K0P9 492 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SLC25A24Q6NUK1 477 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 BLOC1S3Q6QNY0 202 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LRRN1Q6UXK5 716 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LYSMD3Q7Z3D4 306 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CADM2Q8N3J6 435 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 C10orf53Q8N6V4 93 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CHIAQ9BZP6 476 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CDT1Q9H211 546 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 OLAHQ9NV23 265 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FAM120CQ9NX05 1096 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GLTPQ9NZD2 209 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PCDH10Q9P2E7 1040 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FZD10Q9ULW2 581 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NENFQ9UMX5 172 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KIDINS220Q9ULH0 1771 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FXYD6-FXYD2A0A087WZ82 144 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SLC12A8A0AV02 714 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PRORSD1PA6NEY8 169 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 NAP1L6A6NFF2 107 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LRRTM2O43300 516 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 CD2P06729 351 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 THP07101 528 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RETP07949 1114 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 H2AFB2P0C5Z0 115 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF14P17017 642 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 SLC1A2P43004 574 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MAGEA6P43360 314 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 DGKQP52824 942 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 FBXW4P57775 412 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 RPS3AP61247 264 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MS4A2Q01362 244 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 PFKPQ01813 784 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 DSG2Q14126 1118 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 Q3C1V9 767 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GNASQ5JWF2 1037 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ESRP1Q6NXG1 681 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 MSANTD1Q6ZTZ1 278 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM102Q8N9M5 508 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 TXNDC5Q8NBS9 432 aaKnown RBP4.89□□□□□ -1.63
PCDH9-203ENST00000456367 OR7G3Q8NG95 312 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 LMO3Q8TAP4 145 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 ACER1Q8TDN7 264 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 GTF2H4Q92759 462 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KCNN1Q92952 543 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
PCDH9-203ENST00000456367 KLHL5Q96PQ7 755 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms