RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RCOR1Q9UKL0 485 aa4.25□□□□□ -1.73
LINC00393-202ENST00000452852 KLHL20Q9Y2M5 609 aa4.25□□□□□ -1.73
LINC00393-202ENST00000452852 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.25□□□□□ -1.73
LINC00393-202ENST00000452852 COL4A4P53420 1690 aaPredicted RBP4.25□□□□□ -1.73
LINC00393-202ENST00000452852 PTPRSQ13332 1948 aa4.25□□□□□ -1.73
LINC00393-202ENST00000452852 ASTN1O14525 1302 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NEDD4P46934 1319 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 WDR19Q8NEZ3 1342 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TCF20Q9UGU0 1960 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 SIP14410 1827 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TRBV5-3A0A0A0MS03 114 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 KIR2DS5A0A0G2JLQ3 304 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ERICH2A1L162 156 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 KIR2DS3K7RE56 304 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 SMAD9O15198 467 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NTN1O95631 604 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 GOLGA8HP0CJ92 632 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 THEGLP0DJG4 465 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ENO3P13929 434 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 PFKFB1P16118 471 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 CASTP20810 708 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 AZGP1P25311 298 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NMBRP28336 390 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 HSPA4P34932 840 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 COMPP49747 757 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 BPIFB3P59826 476 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 GAD2Q05329 585 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 RBPJQ06330 500 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 MZT1Q08AG7 82 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TRDNQ13061 729 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TRAF1Q13077 416 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 STXBP2Q15833 593 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 SMTNL2Q2TAL5 461 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 FAM98BQ52LJ0 330 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ARHGEF16Q5VV41 709 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NSUN5P2Q63ZY6 315 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 PLEKHA7Q6IQ23 1121 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 INTS8Q75QN2 995 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TRILQ7L0X0 811 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 SPATA19Q7Z5L4 167 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 DEFB128Q7Z7B8 93 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 CCDC190Q86UF4 302 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF589Q86UQ0 364 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TBC1D10CQ8IV04 446 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 TUSC5Q8IXB3 177 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 RBFAQ8N0V3 343 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 KDM1BQ8NB78 822 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 SCCPDHQ8NBX0 429 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ARRDC2Q8TBH0 407 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 CORO2AQ92828 525 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 IWS1Q96ST2 819 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 INTS14Q96SY0 518 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 MSTO1Q9BUK6 570 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ACAT2Q9BWD1 397 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 KCNN2Q9H2S1 579 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NOL11Q9H8H0 719 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 CHMP1AQ9HD42 196 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 ACSS1Q9NUB1 689 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 THEGQ9P2T0 379 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 DDX25Q9UHL0 483 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 MRPL11Q9Y3B7 192 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 STON1Q9Y6Q2 735 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 DDX49Q9Y6V7 483 aaKnown RBP4.24□□□□□ -1.73
LINC00393-202ENST00000452852 NLRC5Q86WI3 1866 aa4.24□□□□□ -1.73
LINC00393-202ENST00000452852 GRIN2DO15399 1336 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 UMODL1Q5DID0 1318 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 TRANK1O15050 2925 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 MICAL3Q7RTP6 2002 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 CHD9Q3L8U1 2897 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 A0A1W2PPM1 405 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 MYMKA6NI61 221 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 A6NNC1 897 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 TLX3O43711 291 aaPredicted RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 CREG1O75629 220 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 GH1P01241 217 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 GBAP04062 536 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 SNHG28P0DPA3 235 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 CHRNB1P11230 501 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 PSG1P11464 419 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 STMN1P16949 149 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 AVPR1AP37288 418 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 METAP2P50579 478 aaKnown RBP eCLIP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ALDH3A2P51648 485 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 CDH12P55289 794 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 TUBB4BP68371 445 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ACTN3Q08043 901 aaPredicted RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 PTGISQ16647 500 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 HEPHL1Q6MZM0 1159 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 SYCP3Q8IZU3 236 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 C10orf53Q8N6V4 93 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 CTCFLQ8NI51 663 aaPredicted RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 PHOSPHO2Q8TCD6 241 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 ZFAND2BQ8WV99 257 aa4.23□□□□□ -1.73
LINC00393-202ENST00000452852 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
LINC00393-202ENST00000452852 OLFM1Q99784 485 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms