RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF470Q6ECI4 717 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 CENPUQ71F23 418 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 RAB43Q86YS6 212 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 MCATQ8IVS2 390 aaKnown RBP14.69□□□□□ -0.06
CHD3-205ENST00000449744 ZBTB2Q8N680 514 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 ADAMTS17Q8TE56 1095 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 DENND1AQ8TEH3 1009 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 DLG3Q92796 817 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 TRIM56Q9BRZ2 755 aaKnown RBP14.69□□□□□ -0.06
CHD3-205ENST00000449744 SLC25A23Q9BV35 468 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 TRMT1Q9NXH9 659 aaKnown RBP14.69□□□□□ -0.06
CHD3-205ENST00000449744 IL1RAPL1Q9NZN1 696 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 SPATA7Q9P0W8 599 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 DHCR7Q9UBM7 475 aaKnown RBP14.69□□□□□ -0.06
CHD3-205ENST00000449744 NEU2Q9Y3R4 380 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 MAD1L1Q9Y6D9 718 aa14.69□□□□□ -0.06
CHD3-205ENST00000449744 K7EM74 188 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 CES2O00748 559 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 CTSBP07858 339 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 ALAS2P22557 587 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 OTX2P32243 289 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 FOLR3P41439 243 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 PGDP52209 483 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 ARSFP54793 590 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 RRADP55042 308 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 TTLL9Q3SXZ7 439 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 CCSMST1Q4G0I0 132 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 FAM69BQ5VUD6 431 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 FIGLAQ6QHK4 219 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 NAT8LQ8N9F0 302 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 CALML6Q8TD86 181 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 ZUFSPQ96AP4 578 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 GBP5Q96PP8 586 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 C20orf96Q9NUD7 363 aaPredicted RBP14.68□□□□□ -0.06
CHD3-205ENST00000449744 SNX12Q9UMY4 172 aa14.68□□□□□ -0.06
CHD3-205ENST00000449744 PTRH2Q9Y3E5 179 aaKnown RBP14.68□□□□□ -0.06
CHD3-205ENST00000449744 USP1O94782 785 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 MATN4O95460 622 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 GRIA3P42263 894 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 CTBP1Q13363 440 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 GBX1Q14549 363 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 SSPNQ14714 243 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 SLC9A5Q14940 896 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 LONRF1Q17RB8 773 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 KLHL38Q2WGJ6 581 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 NKAIN1Q4KMZ8 207 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 ACSBG2Q5FVE4 666 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 TCTE1Q5JU00 501 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 COLEC12Q5KU26 742 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 FCRL6Q6DN72 434 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 MED25Q71SY5 747 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 DENND6AQ8IWF6 608 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 LMNTD2Q8IXW0 634 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 TMEM102Q8N9M5 508 aaPredicted RBP14.67□□□□□ -0.06
CHD3-205ENST00000449744 TTC29Q8NA56 475 aaPredicted RBP14.67□□□□□ -0.06
CHD3-205ENST00000449744 HMGCLL1Q8TB92 370 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
CHD3-205ENST00000449744 IP6K3Q96PC2 410 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 MIPEPQ99797 713 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 FBXO6Q9NRD1 293 aaPredicted RBP14.67□□□□□ -0.06
CHD3-205ENST00000449744 FAM114A2Q9NRY5 505 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 ASIC3Q9UHC3 531 aa14.67□□□□□ -0.06
CHD3-205ENST00000449744 PCDHGA9Q9Y5G4 932 aaKnown RBP14.67□□□□□ -0.06
CHD3-205ENST00000449744 MYO18BQ8IUG5 2567 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 ZCWPW2A0A1B0GU75 182 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 KRT87PA6NCN2 255 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 TARM1B6A8C7 271 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 ZNF185O15231 689 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 PRICKLE3O43900 615 aaPredicted RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 CATP04040 527 aaKnown RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 PIM1P11309 404 aaPredicted RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 TCP1P17987 556 aaKnown RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 PSMB5P28074 263 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 CMPK1P30085 196 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 GRM7Q14831 915 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 NAA25Q14CX7 972 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 YOD1Q5VVQ6 348 aaPredicted RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 TTLL10Q6ZVT0 673 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD3-205ENST00000449744 OR2L3Q8NG85 312 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 OR9A1PQ8NGU1 263 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 GABPB2Q8TAK5 448 aaPredicted RBP14.66□□□□□ -0.06
CHD3-205ENST00000449744 SIGLEC10Q96LC7 697 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 SELENOSQ9BQE4 189 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 FAM167BQ9BTA0 163 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 GALPQ9UBC7 116 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 FAM169AQ9Y6X4 670 aa14.66□□□□□ -0.06
CHD3-205ENST00000449744 TENM4Q6N022 2769 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 SNRNP200O75643 2136 aaKnown RBP14.65□□□□□ -0.06
CHD3-205ENST00000449744 A0A1B0GX78 115 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 ZNF839A8K0R7 811 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 PEX12O00623 359 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 SRPX2O60687 465 aaPredicted RBP14.65□□□□□ -0.06
CHD3-205ENST00000449744 KLF7O75840 302 aaPredicted RBP14.65□□□□□ -0.06
CHD3-205ENST00000449744 PDGFAP04085 211 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 MAGEA3P43357 314 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 TSTA3Q13630 321 aaPredicted RBP14.65□□□□□ -0.06
CHD3-205ENST00000449744 ATP1A4Q13733 1029 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 CYP2A13Q16696 494 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms