RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 RAB17Q9H0T7 212 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SYTL2Q9HCH5 934 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SAYSD1Q9NPB0 183 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 IRAK4Q9NWZ3 460 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 GRHL1Q9NZI5 618 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 SPATA7Q9P0W8 599 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 KLHL42Q9P2K6 505 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 CDC23Q9UJX2 597 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 DHRS7Q9Y394 339 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 UTP11Q9Y3A2 253 aaKnown RBP11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
LSP1P3-201ENST00000449530 FER1L5A0AVI2 2057 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 MYO1CO00159 1063 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 HCRTR1O43613 425 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 KATNA1O75449 491 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 SYF2O95926 243 aaKnown RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 AHSGP02765 367 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 MSL3P1P0C860 447 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 MPC1LP0DKB6 136 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 ENO3P13929 434 aaPredicted RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 F8A1P23610 371 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 OAS2P29728 719 aaKnown RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 CDKN2DP55273 166 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 CDC20Q12834 499 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 DNASE1L3Q13609 305 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 TSTA3Q13630 321 aaPredicted RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 SF1Q15637 639 aaKnown RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 DUPD1Q68J44 220 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 C8orf74Q6P047 294 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 GPR135Q8IZ08 494 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC38A9Q8NBW4 561 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 OR9A1PQ8NGU1 263 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 EXTL1Q92935 676 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 MR1Q95460 341 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 MIPEPQ99797 713 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC7A5P2Q9GIP4 190 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 ACTR5Q9H9F9 607 aaPredicted RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 INTS7Q9NVH2 962 aaKnown RBP11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 TAS2R13Q9NYV9 303 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 PADI1Q9ULC6 663 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 PSAT1Q9Y617 370 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
LSP1P3-201ENST00000449530 E7EQ34 232 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 NKX2-8O15522 239 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 OR2B3O76000 313 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CTSBP07858 339 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CBSLP0DN79 551 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 TCN2P20062 427 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CBSP35520 551 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 GABRA4P48169 554 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 RGS4P49798 205 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 PGGT1BP53609 377 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 TIAL1Q01085 375 aaKnown RBP eCLIP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 MGAT5Q09328 741 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 LY6DQ14210 128 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 FASTKQ14296 549 aaKnown RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 FRG1Q14331 258 aaKnown RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CYP2A13Q16696 494 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 WHAMMP3Q1A5X7 153 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 ATP1A1-AS1Q5TC04 95 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 HECTD2Q5U5R9 776 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 UGT3A1Q6NUS8 523 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 C16orf46Q6P387 395 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 FAM199XQ6PEV8 388 aaPredicted RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 GALNT7Q86SF2 657 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CCDC25Q86WR0 208 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 PPFIBP2Q8ND30 876 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 HMGCLL1Q8TB92 370 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 PYROXD1Q8WU10 500 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 LINGO1Q96FE5 620 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 RUFY1Q96T51 708 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 PKP4Q99569 1192 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 SERTAD3Q9UJW9 196 aa11.48□□□□□ -0.57
LSP1P3-201ENST00000449530 A0A1W2PPV9 198 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ESYT3A0FGR9 886 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 C21orf140B9A014 251 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ZSCAN9O15535 394 aaPredicted RBP11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ZNF749O43361 778 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 PRICKLE3O43900 615 aaPredicted RBP11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 NRP2O60462 931 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 FKBP9O95302 570 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC16A8O95907 504 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ITGB2P05107 769 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 ERGP11308 486 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 FDXRP22570 491 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 RPA3P35244 121 aaPredicted RBP11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 PNLIPRP1P54315 467 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 PLTPP55058 493 aa11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 RPS18P62269 152 aaKnown RBP11.47□□□□□ -0.57
LSP1P3-201ENST00000449530 SLC7A5Q01650 507 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms