RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MUSKO15146 869 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PROM1O43490 865 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 VPS26AO75436 327 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 POU3F3P20264 500 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PTX3P26022 381 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 KRT20P35900 424 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 KCNC1P48547 511 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 MAP2K5Q13163 448 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 TYW3Q6IPR3 259 aaKnown RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PKN3Q6P5Z2 889 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PDZD4Q76G19 769 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 DGLUCYQ7Z3D6 616 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 SCUBE3Q8IX30 993 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 CIDECQ96AQ7 238 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 GPR137Q96N19 417 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PITX2Q99697 317 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 SRRQ9GZT4 340 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 FARSBQ9NSD9 589 aaKnown RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 A0A1W2PRG6 482 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 TSPAN4O14817 238 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 NCAM2O15394 837 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 CD3EAPO15446 510 aaKnown RBP18.74■□□□□ 0.59
HMGA1-205ENST00000447654 AKR7A2O43488 359 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 WDPCPO95876 746 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 RETP07949 1114 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 ALAS2P22557 587 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PER3P56645 1201 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 MAB21L1Q13394 359 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 GNA13Q14344 377 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 FAM214AQ32MH5 1076 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 ARHGAP36Q6ZRI8 547 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 ABI1Q8IZP0 508 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 GDPD1Q8N9F7 314 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 RHBDF1Q96CC6 855 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 PDXPQ96GD0 296 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 CRELD1Q96HD1 420 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 VAT1Q99536 393 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 MMP28Q9H239 520 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 SLC23A1Q9UHI7 598 aa18.74■□□□□ 0.59
HMGA1-205ENST00000447654 DDCP20711 480 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 LMO2P25791 158 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 PGGT1BP53609 377 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 SH3BP2P78314 561 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 SOX4Q06945 474 aaPredicted RBP18.73■□□□□ 0.59
HMGA1-205ENST00000447654 OLIG2Q13516 323 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 C9orf57Q5W0N0 161 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 AHSA2Q719I0 299 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 ARRDC4Q8NCT1 418 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 OR8H1Q8NGG4 311 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 PHF21BQ96EK2 531 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 OPALINQ96PE5 141 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 MCCC1Q96RQ3 725 aaPredicted RBP18.73■□□□□ 0.59
HMGA1-205ENST00000447654 CARS2Q9HA77 564 aaKnown RBP18.73■□□□□ 0.59
HMGA1-205ENST00000447654 OLA1Q9NTK5 396 aaKnown RBP18.73■□□□□ 0.59
HMGA1-205ENST00000447654 TAS2R7Q9NYW3 318 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 RALGAPA2Q2PPJ7 1873 aa18.73■□□□□ 0.59
HMGA1-205ENST00000447654 A0A1B0GVM2 712 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 SMIM35A0A1B0GVV1 85 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 A0A1W2PQ09 198 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 GSTA4O15217 222 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ERN1O75460 977 aaKnown RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 HTR7P34969 479 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 IRF3Q14653 427 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 NKG7Q16617 165 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 UBXN11Q5T124 520 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 KDM4DQ6B0I6 523 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 NOTUMQ6P988 496 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ENPP6Q6UWR7 440 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 DLEU7Q6UYE1 221 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 TMPRSS11AQ6ZMR5 421 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 TMEM179BQ7Z7N9 219 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 KLHDC8BQ8IXV7 354 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 UBASH3BQ8TF42 649 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 CLEC4CQ8WTT0 213 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 MSANTD3Q96H12 275 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ZC3HAV1LQ96H79 300 aaKnown RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 COPS4Q9BT78 406 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ADGRE2Q9UHX3 823 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 GLS2Q9UI32 602 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 PIN4Q9Y237 131 aaKnown RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 KLF2Q9Y5W3 355 aaPredicted RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 C9JVG2 144 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 RFPL3O75679 317 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 DNTTP04053 509 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 CLCN5P51795 746 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ARHGDIAP52565 204 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ZNF267Q14586 743 aaPredicted RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 GPR19Q15760 415 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 AANATQ16613 207 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ANKRD34AQ69YU3 496 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 PM20D1Q6GTS8 502 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 C19orf48Q6RUI8 117 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 TEX261Q6UWH6 196 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ANKS3Q6ZW76 656 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 RPS27LQ71UM5 84 aaKnown RBP18.72■□□□□ 0.59
HMGA1-205ENST00000447654 ZFAND4Q86XD8 727 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 SLC35F5Q8WV83 523 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 Q96MT0 163 aa18.72■□□□□ 0.59
HMGA1-205ENST00000447654 MLPHQ9BV36 600 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms