RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ESR1P03372 595 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 MLNP12872 115 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 ITGAXP20702 1163 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 OGNP20774 298 aaKnown RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 MCM3P25205 808 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 PSMB5P28074 263 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 OTX2P32243 289 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 YBX1P67809 324 aaKnown RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 FASTKQ14296 549 aaKnown RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 SSPNQ14714 243 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 NADK2Q4G0N4 442 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 NKAIN1Q4KMZ8 207 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 ACSBG2Q5FVE4 666 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 CASC4Q6P4E1 433 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 TTC23LQ6PF05 361 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 CNSTQ6PJW8 725 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 CCDC137Q6PK04 289 aaKnown RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 CILP2Q8IUL8 1156 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 SLC35F6Q8N357 371 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 GSDMBQ8TAX9 411 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 HMGCLL1Q8TB92 370 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 MIB2Q96AX9 1013 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 ZNF285Q96NJ3 590 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 SLC30A3Q99726 388 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 IRAK4Q9NWZ3 460 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 IFT80Q9P2H3 777 aaPredicted RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 PTRH2Q9Y3E5 179 aaKnown RBP19.92■□□□□ 0.78
SDC1-205ENST00000447124 SPENQ96T58 3664 aaKnown RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 COL12A1Q99715 3063 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 RP1L1Q8IWN7 2480 aaPredicted RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 ZCWPW2A0A1B0GU75 182 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 FAM237BA0A1B0GVD1 139 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 MAGEB16A2A368 324 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 A6NL46 340 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 CYSRT1A8MQ03 144 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 NRDCO43847 1150 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 CTSVO60911 334 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 PKMP14618 531 aaKnown RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 CHRM3P20309 590 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 ALAS2P22557 587 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 PGDP52209 483 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 DHX34Q14147 1143 aaKnown RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 ARMC3Q5W041 872 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 MED25Q71SY5 747 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 TMEM102Q8N9M5 508 aaPredicted RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 OR2A1Q8NGT9 310 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 ZUFSPQ96AP4 578 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 ZNF669Q96BR6 464 aaPredicted RBP19.91■□□□□ 0.78
SDC1-205ENST00000447124 SIGLEC10Q96LC7 697 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 SERPINB12Q96P63 405 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 MIPEPQ99797 713 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 NDC1Q9BTX1 674 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 NUDT9Q9BW91 350 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 ENAMQ9NRM1 1142 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 TXLNGQ9NUQ3 528 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 SRPK3Q9UPE1 567 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 MED16Q9Y2X0 877 aa19.91■□□□□ 0.78
SDC1-205ENST00000447124 DOPEY2Q9Y3R5 2298 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 TARM1B6A8C7 271 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 H3BMM5 538 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 MASP2O00187 686 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 NRP2O60462 931 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 ONECUT2O95948 504 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 UMODP07911 640 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 CTBP1Q13363 440 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 CYP2A13Q16696 494 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.9■□□□□ 0.78
SDC1-205ENST00000447124 ZNF549Q6P9A3 640 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 TTLL10Q6ZVT0 673 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 RAB43Q86YS6 212 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 DENND6AQ8IWF6 608 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 NAT8LQ8N9F0 302 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.9■□□□□ 0.78
SDC1-205ENST00000447124 FOPNLQ96NB1 174 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 C17orf62Q9BQA9 187 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 RAB11FIP5Q9BXF6 653 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 INTS7Q9NVH2 962 aaKnown RBP19.9■□□□□ 0.78
SDC1-205ENST00000447124 GPN3Q9UHW5 284 aaPredicted RBP19.9■□□□□ 0.78
SDC1-205ENST00000447124 PADI2Q9Y2J8 665 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 KLK4Q9Y5K2 254 aa19.9■□□□□ 0.78
SDC1-205ENST00000447124 ARHGEF33A8MVX0 844 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 ATP5DP30049 168 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 CCNFP41002 786 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 MAGEA3P43357 314 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 CD97P48960 835 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 CLCN7P51798 805 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 SRSF1Q07955 248 aaKnown RBP eCLIP19.89■□□□□ 0.77
SDC1-205ENST00000447124 KLHL38Q2WGJ6 581 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 ZC3H12BQ5HYM0 836 aaKnown RBP19.89■□□□□ 0.77
SDC1-205ENST00000447124 FBXO42Q6P3S6 717 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 MRGPREQ86SM8 312 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 DTWD1Q8N5C7 304 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 OR2L3Q8NG85 312 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 OR2Y1Q8NGV0 311 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 ACTRT1Q8TDG2 376 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 PTERQ96BW5 349 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 OSBPL9Q96SU4 736 aa19.89■□□□□ 0.77
SDC1-205ENST00000447124 XAB2Q9HCS7 855 aaKnown RBP19.89■□□□□ 0.77
SDC1-205ENST00000447124 SAMD15Q9P1V8 674 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms