RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 KLHDC8AQ8IYD2 350 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 RAB7BQ96AH8 199 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 APIPQ96GX9 242 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 FOPNLQ96NB1 174 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 ZBTB18Q99592 522 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 KCTD14Q9BQ13 255 aaPredicted RBP16.95■□□□□ 0.3
SMC6-206ENST00000446852 BATF3Q9NR55 127 aa16.95■□□□□ 0.3
SMC6-206ENST00000446852 MID1O15344 667 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 MTHFD1P11586 935 aaKnown RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 TACR1P25103 407 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 SOX11P35716 441 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 EEFSECP57772 596 aaKnown RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 DOC2AQ14183 400 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ITPRIPL2Q3MIP1 535 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ATAT1Q5SQI0 421 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 AGBL4Q5VU57 503 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 LIPJQ5W064 366 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 C11orf96Q7Z7L8 435 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 PTRH1Q86Y79 214 aaKnown RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 CHPFQ8IZ52 775 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 GLB1L3Q8NCI6 653 aaPredicted RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 OR56A3Q8NH54 315 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 CGREF1Q99674 301 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 CLEC1BQ9P126 229 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 C15orf38-AP3S2A0A0A6YYH1 394 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 AQP12BA6NM10 295 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 CLGNO14967 610 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 UGDHO60701 494 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 APODP05090 189 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 MAPK9P45984 424 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 MTPNP58546 118 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 PWP1Q13610 501 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ENPP2Q13822 863 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 C2orf27AQ580R0 203 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ARPINQ7Z6K5 226 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 AQP12AQ8IXF9 295 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ICA1LQ8NDH6 482 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 ADCY4Q8NFM4 1077 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 GTF2H4Q92759 462 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 GATA6Q92908 595 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 CMTM7Q96FZ5 175 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 LINC00615Q96LM1 132 aaPredicted RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 UHRF1Q96T88 793 aaPredicted RBP16.94■□□□□ 0.3
SMC6-206ENST00000446852 SEMA6AQ9H2E6 1030 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 PIF1Q9H611 641 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 SERGEFQ9UGK8 458 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 TMEM98Q9Y2Y6 226 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 PRKAB1Q9Y478 270 aa16.94■□□□□ 0.3
SMC6-206ENST00000446852 IGLON5A6NGN9 336 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 NPIPB8E9PQR5 432 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 POP7O75817 140 aaKnown RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 PGRP06401 933 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 UQCRBP14927 111 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 NCK1P16333 377 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 RPS14P62263 151 aaKnown RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 GTF2H3Q13889 308 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 NFE2L1Q14494 772 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 CST6Q15828 149 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 FAM46CQ5VWP2 391 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 HMBOX1Q6NT76 420 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 RALGPS2Q86X27 583 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 GALNT13Q8IUC8 556 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 WDR20Q8TBZ3 569 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 ZNF480Q8WV37 535 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 COX14Q96I36 57 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 HIC2Q96JB3 615 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 RSPH9Q9H1X1 276 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 VAPAQ9P0L0 249 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 SERTM1A2A2V5 107 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 DFNA5O60443 496 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 SDC1P18827 310 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 OXTRP30559 389 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 FAM83HQ6ZRV2 1179 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 LMNTD1Q8N9Z9 388 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 FBXO15Q8NCQ5 510 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 EZH1Q92800 747 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 ZNF514Q96K75 400 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 MAGEB10Q96LZ2 347 aaPredicted RBP16.93■□□□□ 0.3
SMC6-206ENST00000446852 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 S1PR5Q9H228 398 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 SNX13Q9Y5W8 968 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 BRWD1Q9NSI6 2320 aa16.93■□□□□ 0.3
SMC6-206ENST00000446852 VEGFDO43915 354 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 RNASEH1O60930 286 aaKnown RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 TIPRLO75663 272 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 IL6P05231 212 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 OR4D2P58180 307 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 PHC1P78364 1004 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 MRPS35P82673 323 aaKnown RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 FXNQ16595 210 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 MAPKAPK3Q16644 382 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 ADNP2Q6IQ32 1131 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 ADAMTSL4Q6UY14 1074 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 PRR23BQ6ZRT6 265 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 HEATR4Q86WZ0 1026 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 ZNF513Q8N8E2 541 aaPredicted RBP16.92■□□□□ 0.3
SMC6-206ENST00000446852 APOLD1Q96LR9 279 aa16.92■□□□□ 0.3
SMC6-206ENST00000446852 TSSK3Q96PN8 268 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms