RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 CUZD1Q86UP6 607 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 CLIP4Q8N3C7 705 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 CPSF7Q8N684 471 aaKnown RBP3.82□□□□□ -1.8
LINC01004-201ENST00000445184 ANKRD13CQ8N6S4 541 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 TEX9Q8N6V9 391 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 SLC4A11Q8NBS3 891 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.82□□□□□ -1.8
LINC01004-201ENST00000445184 LRRC8CQ8TDW0 803 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 FAM216AQ8WUB2 273 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 RIT1Q92963 219 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 CCDC47Q96A33 483 aaKnown RBP3.82□□□□□ -1.8
LINC01004-201ENST00000445184 HES6Q96HZ4 224 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 MTERF1Q99551 399 aaKnown RBP3.82□□□□□ -1.8
LINC01004-201ENST00000445184 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 VN1R1Q9GZP7 353 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 SEMA6AQ9H2E6 1030 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 CDH20Q9HBT6 801 aa3.82□□□□□ -1.8
LINC01004-201ENST00000445184 NWD1Q149M9 1564 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 CDK13Q14004 1512 aaKnown RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ERICH3Q5RHP9 1530 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 DENND4BO75064 1496 aaPredicted RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 MAGI2Q86UL8 1455 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 FAM135BQ49AJ0 1406 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 PCDH11YQ9BZA8 1340 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 A0A1B0GVT2 93 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RPS10-NUDT3A0A1W2PQS6 291 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SRRM3A6NNA2 597 aaPredicted RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ZNF587BE7ETH6 402 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 PGRMC2O15173 223 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 BUD23O43709 281 aaKnown RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 VEGFDO43915 354 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RNASEH1O60930 286 aaKnown RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SEC22BO75396 215 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 AKAP3O75969 853 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SPP1P10451 314 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 PSMB4P28070 264 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SSTR2P30874 369 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ENTPD1P49961 510 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 MMP15P51511 669 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 IL1RL1Q01638 556 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 DHX34Q14147 1143 aaKnown RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RCN2Q14257 317 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 PPA1Q15181 289 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SGCBQ16585 318 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RAB12Q6IQ22 244 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 TRNP1Q6NT89 227 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RGMBQ6NW40 437 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ENPP7Q6UWV6 458 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 L3MBTL4Q8NA19 623 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 OR5M8Q8NGP6 311 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SLC38A5Q8WUX1 472 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ZFAND2BQ8WV99 257 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SSMEM1Q8WWF3 244 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SCMH1Q96GD3 660 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 LMLNQ96KR4 655 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SFXN2Q96NB2 322 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 RAD9AQ99638 391 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 DCLK3Q9C098 648 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 ACKR4Q9NPB9 350 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 PRMT8Q9NR22 394 aaPredicted RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 KLHL1Q9NR64 748 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 P4HTMQ9NXG6 502 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 TBC1D7Q9P0N9 293 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 IL19Q9UHD0 177 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 FZD10Q9ULW2 581 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 DLGAP4Q9Y2H0 992 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 TEX264Q9Y6I9 313 aa3.81□□□□□ -1.8
LINC01004-201ENST00000445184 TRIP12Q14669 1992 aaPredicted RBP3.81□□□□□ -1.8
LINC01004-201ENST00000445184 SYNMO15061 1565 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 RAPGEF2Q9Y4G8 1499 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 PDS5AQ29RF7 1337 aaKnown RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 hDV102S1A0JD36 115 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 ELOVL7A1L3X0 281 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 CASTOR2A6NHX0 329 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 TMEM178BH3BS89 294 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 CAPN9O14815 690 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 MOCS3O95396 460 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 CLDN14O95500 239 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 ACSL3O95573 720 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 GH1P01241 217 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 RLN1P04808 185 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 HAPLN1P10915 354 aaPredicted RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 ITIH1P19827 911 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 IL10P22301 178 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 AZGP1P25311 298 aaKnown RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 ATP6V1E1P36543 226 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 IER3P46695 156 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 MAPK12P53778 367 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 NPRL3Q12980 569 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 SMC1AQ14683 1233 aaKnown RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 PTGISQ16647 500 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 CA9Q16790 459 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 TYW3Q6IPR3 259 aaKnown RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
LINC01004-201ENST00000445184 KCTD9Q7L273 389 aa3.8□□□□□ -1.8
LINC01004-201ENST00000445184 NUDT13Q86X67 352 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms