RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 KDM1AO60341 852 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 C1orf105O95561 183 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 CHRM5P08912 532 aaPredicted RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 NELFEP18615 380 aaKnown RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 CD82P27701 267 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 PKLRP30613 574 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 ARL4DP49703 201 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 RAB28P51157 221 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 PGGT1BP53609 377 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 CDKN2DP55273 166 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 RAB15P59190 212 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 ZNF844Q08AG5 666 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 GRB7Q14451 532 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 TAF1BQ53T94 588 aaPredicted RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 DCAF12Q5T6F0 453 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 C2orf73Q8N5S3 287 aaPredicted RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
CCDC188-201ENST00000439765 KLHL6Q8WZ60 621 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 ELMO2Q96JJ3 720 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 OR6C1Q96RD1 312 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 RBBP8Q99708 897 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 MENTQ9BUN1 341 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 DDA1Q9BW61 102 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 SOHLH2Q9NX45 425 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 OR6C2Q9NZP2 312 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 DHRS7Q9Y394 339 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 TLDC2A0PJX2 215 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 SASH3O75995 380 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 MATN4O95460 622 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 EBLN1P0CF75 366 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 PVRP15151 417 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 UGT2B7P16662 529 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 PRDX3P30048 256 aaKnown RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 SERPINB9P50453 376 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 MC2RQ01718 297 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 RASA2Q15283 850 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 TGIF1Q15583 401 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 CEP85LQ5SZL2 805 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 TTC23LQ6PF05 361 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 SPESP1Q6UW49 350 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 PIWIL4Q7Z3Z4 852 aaKnown RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 ZC3HC1Q86WB0 502 aaKnown RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 ZFAND4Q86XD8 727 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 ZNF843Q8N446 348 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 INPP5DQ92835 1189 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 EURLQ9NYK6 297 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 TAS2R13Q9NYV9 303 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 PSMC3IPQ9P2W1 217 aaPredicted RBP17.09■□□□□ 0.33
CCDC188-201ENST00000439765 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
CCDC188-201ENST00000439765 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 POLR1CO15160 346 aaPredicted RBP17.08■□□□□ 0.32
CCDC188-201ENST00000439765 EFSO43281 561 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 ATP8B1O43520 1251 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 CDH16O75309 829 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 ZBTB11O95625 1053 aaPredicted RBP17.08■□□□□ 0.32
CCDC188-201ENST00000439765 ST6GAL1P15907 406 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 PEBP1P30086 187 aaKnown RBP17.08■□□□□ 0.32
CCDC188-201ENST00000439765 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 HSD11B2P80365 405 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 TIAL1Q01085 375 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC188-201ENST00000439765 ILF2Q12905 390 aaKnown RBP17.08■□□□□ 0.32
CCDC188-201ENST00000439765 TUBB3Q13509 450 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 CROCCP2Q86T23 111 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 RAD51AP1Q96B01 352 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 SLC41A2Q96JW4 573 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 RUFY1Q96T51 708 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 OLFM1Q99784 485 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 SEMA5BQ9P283 1151 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 KLHL42Q9P2K6 505 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 PCDHB11Q9Y5F2 797 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 PCDHGA3Q9Y5H0 932 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 PCM1Q15154 2024 aa17.08■□□□□ 0.32
CCDC188-201ENST00000439765 SLC9B1P1A6NJY1 282 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 ISM1B1AKI9 464 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 AGPSO00116 658 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 ENO3P13929 434 aaPredicted RBP17.07■□□□□ 0.32
CCDC188-201ENST00000439765 FOLR1P15328 257 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 SAT1P21673 171 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 CNTFP26441 200 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 CCNFP41002 786 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 PDAP1Q13442 181 aaKnown RBP17.07■□□□□ 0.32
CCDC188-201ENST00000439765 KRT71Q3SY84 523 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 LGSNQ5TDP6 509 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 HECTD2Q5U5R9 776 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 UGT3A1Q6NUS8 523 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 CEACAM20Q6UY09 585 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 NEK10Q6ZWH5 1172 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 KMT5CQ86Y97 462 aa17.07■□□□□ 0.32
CCDC188-201ENST00000439765 RIBC1Q8N443 379 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms