RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 WDR20Q8TBZ3 569 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 SLC13A3Q8WWT9 602 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 FOXJ1Q92949 421 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 MTFMTQ96DP5 389 aaKnown RBP11.44□□□□□ -0.58
SMAD3-202ENST00000439724 FCRL1Q96LA6 429 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 UHRF1Q96T88 793 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-202ENST00000439724 ALG2Q9H553 416 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 COPS7BQ9H9Q2 264 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-202ENST00000439724 NANOGQ9H9S0 305 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 BATF3Q9NR55 127 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 GPRC5BQ9NZH0 403 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 ACTR3BQ9P1U1 418 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
SMAD3-202ENST00000439724 AP4S1Q9Y587 144 aa11.44□□□□□ -0.58
SMAD3-202ENST00000439724 CHD9Q3L8U1 2897 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 H0YIV9 168 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CLGNO14967 610 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 RNASEH2AO75792 299 aaKnown RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 IL6P05231 212 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 HSD3B1P14060 373 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 HSD3B2P26439 372 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 ACADLP28330 430 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 HTR1EP28566 365 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CASP2P42575 452 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 WASP42768 502 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 GALK1P51570 392 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 NEK2P51955 445 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 DGKQP52824 942 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CLNS1AP54105 237 aaKnown RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 PNLIPRP1P54315 467 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 RPS14P62263 151 aaKnown RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 YBX1P67809 324 aaKnown RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CDK3Q00526 305 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 LIPEQ05469 1076 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 RPA4Q13156 261 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 DOC2AQ14183 400 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 XKR6Q5GH73 641 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 RABL3Q5HYI8 236 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 ZNF776Q68DI1 518 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 ANO7Q6IWH7 933 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CRTC3Q6UUV7 619 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 UNC5DQ6UXZ4 953 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CYP2R1Q6VVX0 501 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 HEATR4Q86WZ0 1026 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 TICAM1Q8IUC6 712 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 TMEM102Q8N9M5 508 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 PLA2G15Q8NCC3 412 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 ZNF480Q8WV37 535 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 EZH1Q92800 747 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 SLCO4A1Q96BD0 722 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 METTL2AQ96IZ6 378 aaKnown RBP11.43□□□□□ -0.58
SMAD3-202ENST00000439724 OR4K3Q96R72 315 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 CGREF1Q99674 301 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 PKP2Q99959 881 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 EFHD1Q9BUP0 239 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 ITM2CQ9NQX7 267 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 DLGAP4Q9Y2H0 992 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 DTNAQ9Y4J8 743 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 SNX13Q9Y5W8 968 aa11.43□□□□□ -0.58
SMAD3-202ENST00000439724 TRPM6Q9BX84 2022 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 IGLON5A6NGN9 336 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 E7EQ34 232 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 K7EQS6 105 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 ARPC2O15144 300 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 KCNH1O95259 989 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 AMD1P17707 334 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 SOX9P48436 509 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 DLX2Q07687 328 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 BLMHQ13867 455 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 NFE2L1Q14494 772 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 WSCD2Q2TBF2 565 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 GRAMD1BQ3KR37 738 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 FAM174BQ3ZCQ3 159 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 SPANXN4Q5MJ08 99 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 CAPN13Q6MZZ7 669 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 HDDC3Q8N4P3 179 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 OXR1Q8N573 874 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 OR8J3Q8NGG0 315 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 OR9A1PQ8NGU1 263 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 DNAJB8Q8NHS0 232 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 CSGALNACT1Q8TDX6 532 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 FAM131CQ96AQ9 280 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 TESCQ96BS2 214 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 ERLEC1Q96DZ1 483 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 WDR34Q96EX3 536 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 MED8Q96G25 268 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 BTBD9Q96Q07 612 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 KCTD14Q9BQ13 255 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 SGPP1Q9BX95 441 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 OR52A5Q9H2C5 316 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 FBRSQ9HAH7 460 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 BRF2Q9HAW0 419 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 ARMC1Q9NVT9 282 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-202ENST00000439724 NEUROG3Q9Y4Z2 214 aa11.42□□□□□ -0.58
SMAD3-202ENST00000439724 KCNE2Q9Y6J6 123 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms