RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LMAN2Q12907 356 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 MEP1AQ16819 746 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 RUNDC3AQ59EK9 446 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 LAIR2Q6ISS4 152 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 FAM117BQ6P1L5 589 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 DHRS4L2Q6PKH6 230 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 SPESP1Q6UW49 350 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ZNF783Q6ZMS7 281 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 R3HCC1LQ7Z5L2 792 aaKnown RBP10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 NECAB2Q7Z6G3 386 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 C11orf74Q86VG3 221 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 VRK3Q8IV63 474 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 BBS7Q8IWZ6 715 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 NXPE1Q8N323 547 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 NETO1Q8TDF5 533 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 FRS2Q8WU20 508 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ULK4Q96C45 1275 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 CCDC115Q96NT0 180 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 TSSK3Q96PN8 268 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 DOK1Q99704 481 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ADNPQ9H2P0 1102 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ACTR8Q9H981 624 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 MARCH7Q9H992 704 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 SERHLQ9NQF3 203 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 C8orf4Q9NR00 106 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 TRBV5-3A0A0A0MS03 114 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ELOVL7A1L3X0 281 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 PRAMEF4O60810 478 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 LRATO95237 230 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 HTR1AP08908 422 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 EPB42P16452 691 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 GJA1P17302 382 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 AGXTP21549 392 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 BFSP2Q13515 415 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 PON2Q15165 354 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 CTU2Q2VPK5 515 aaKnown RBP10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ATP13A5Q4VNC0 1218 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 PRAMEF9Q5VWM5 478 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 CRTC1Q6UUV9 634 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 DET1Q7L5Y6 550 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ZDHHC13Q8IUH4 622 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 MYLIPQ8WY64 445 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 USP7Q93009 1102 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ITPKCQ96DU7 683 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 SLC47A1Q96FL8 570 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 NTMT1Q9BV86 223 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ING2Q9H160 280 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 KAT8Q9H7Z6 458 aaKnown RBP10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 INVSQ9Y283 1065 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 ANKRD34BA5PLL1 514 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 STK16O75716 305 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF182P17025 639 aaPredicted RBP10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 LHCGRP22888 699 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 BMXP51813 675 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 PPP2R2BQ00005 443 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 LRRC66Q68CR7 880 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 MACC1Q6ZN28 852 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 PRR23BQ6ZRT6 265 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 BPIFB6Q8NFQ5 453 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM162AQ96A26 154 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 TRMT2BQ96GJ1 504 aaKnown RBP10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 ZBTB18Q99592 522 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 TRPV5Q9NQA5 729 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM118AQ9NWS6 357 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 CDH7Q9ULB5 785 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 PPT2Q9UMR5 302 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 PDE10AQ9Y233 779 aa10.15□□□□□ -0.79
CLSTN1-203ENST00000435891 AXIN1O15169 862 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 AQP9O43315 295 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 MTX2O75431 263 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 RPIAP49247 311 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 HSPA14Q0VDF9 509 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 WDR45BQ5MNZ6 344 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GALNT10Q86SR1 603 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SNX19Q92543 992 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 NCLNQ969V3 563 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 BARD1Q99728 777 aaKnown RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 C2orf49Q9BVC5 232 aaPredicted RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SMG9Q9H0W8 520 aaKnown RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GIMAP4Q9NUV9 329 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ARL15Q9NXU5 204 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 VNN3Q9NY84 501 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 AASSQ9UDR5 926 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CD84Q9UIB8 345 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 HOXA2O43364 376 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 GUCY1B2O75343 617 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CPNE6O95741 557 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 EBLN1P0CF75 366 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 PFKLP17858 780 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 MSH3P20585 1137 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 CRHBPP24387 322 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 PTPN6P29350 595 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 SPAM1P38567 509 aa10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CLSTN1-203ENST00000435891 KCNAB2Q13303 367 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms