RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 CCDC77Q9BR77 488 aa24.26■■□□□ 1.47
CPNE1-212ENST00000430570 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-212ENST00000430570 NOVA2Q9UNW9 492 aaKnown RBP24.26■■□□□ 1.47
CPNE1-212ENST00000430570 KLHL20Q9Y2M5 609 aa24.26■■□□□ 1.47
CPNE1-212ENST00000430570 ACOT9Q9Y305 439 aa24.26■■□□□ 1.47
CPNE1-212ENST00000430570 C1QTNF9BB2RNN3 333 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SNRNP200O75643 2136 aaKnown RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 TNFSF15O95150 251 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 GUCA1CO95843 209 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SNRPAP09012 282 aaKnown RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 HIST1H2AGP0C0S8 130 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 C1QTNF9P0C862 333 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 HIST1H2ADP20671 130 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 CNTFP26441 200 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 HSD17B2P37059 387 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 MAPK10P53779 464 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 YBX1P67809 324 aaKnown RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 TSTA3Q13630 321 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 KCNAB1Q14722 419 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 OR4D1Q15615 310 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SLC5A12Q1EHB4 618 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 TAOK1Q7L7X3 1001 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SYTL1Q8IYJ3 562 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 CENPLQ8N0S6 344 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 OR2A1Q8NGT9 310 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SMPDL3AQ92484 453 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 PMEPA1Q969W9 287 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 NXPE2Q96DL1 559 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 HIST1H2AHQ96KK5 128 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SLC46A1Q96NT5 459 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 HIST1H2AJQ99878 128 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 H2AFJQ9BTM1 129 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 SIDT1Q9NXL6 827 aaKnown RBP24.25■■□□□ 1.47
CPNE1-212ENST00000430570 ARL15Q9NXU5 204 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 TLK1Q9UKI8 766 aa24.25■■□□□ 1.47
CPNE1-212ENST00000430570 A0A087X1B8 175 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 A0A0J9YY10 115 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 BRINP1O60477 761 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ZBTB11O95625 1053 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-212ENST00000430570 TUBBP07437 444 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ENO2P09104 434 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-212ENST00000430570 KCNC1P48547 511 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ATP6V0D1P61421 351 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 SF1Q15637 639 aaKnown RBP24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ZIC1Q15915 447 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 KIAA1614Q5VZ46 1190 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 TBC1D1Q86TI0 1168 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-212ENST00000430570 KMT5CQ86Y97 462 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 CARFQ8N187 725 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 OR2W6PQ8NHA6 318 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 MDM1Q8TC05 714 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 SLC22A18Q96BI1 424 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ACAT2Q9BWD1 397 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 TRIM54Q9BYV2 358 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ATG10Q9H0Y0 220 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 VPS11Q9H270 941 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 APMAPQ9HDC9 416 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ABCF3Q9NUQ8 709 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 OARD1Q9Y530 152 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 ADAMTS20P59510 1910 aa24.24■■□□□ 1.47
CPNE1-212ENST00000430570 B4E171 279 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 KRT37O76014 449 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 LTA4HP09960 611 aaKnown RBP24.23■■□□□ 1.47
CPNE1-212ENST00000430570 FOLR1P15328 257 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 TSPAN7P41732 249 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 SLCO1A2P46721 670 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 HSD11B2P80365 405 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 MC2RQ01718 297 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 LGSNQ5TDP6 509 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 AGTRAPQ6RW13 159 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 ADAMTSL2Q86TH1 951 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 ISCA2Q86U28 154 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 PLD6Q8N2A8 252 aaKnown RBP24.23■■□□□ 1.47
CPNE1-212ENST00000430570 D2HGDHQ8N465 521 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 USP7Q93009 1102 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 KIAA1191Q96A73 305 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 MIPEPQ99797 713 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 ASCL3Q9NQ33 180 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 PSMC3IPQ9P2W1 217 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-212ENST00000430570 TBK1Q9UHD2 729 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 BTRCQ9Y297 605 aa24.23■■□□□ 1.47
CPNE1-212ENST00000430570 PCM1Q15154 2024 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 ZNF839A8K0R7 811 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 CAPNS1P04632 268 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 EBLN1P0CF75 366 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 SLC26A3P40879 764 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 ARL4DP49703 201 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 AP1S2P56377 157 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 NAE1Q13564 534 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 TAF1BQ53T94 588 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-212ENST00000430570 TIFABQ6ZNK6 161 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 EPS8L3Q8TE67 593 aaKnown RBP24.22■■□□□ 1.47
CPNE1-212ENST00000430570 MZB1Q8WU39 189 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 FBXL8Q96CD0 374 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 CTRCQ99895 268 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 ALG9Q9H6U8 611 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 NMRAL1Q9HBL8 299 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 FAM60AQ9NP50 221 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 ZNF358Q9NW07 568 aa24.22■■□□□ 1.47
CPNE1-212ENST00000430570 SOHLH2Q9NX45 425 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms