RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 TTC23LQ6PF05 361 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 IGFL2Q6UWQ7 119 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 NAPRTQ6XQN6 538 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 LRRC6Q86X45 466 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 LURAP1LQ8IV03 231 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 HMGCLL1Q8TB92 370 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 PPP4R1Q8TF05 950 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 ZNF778Q96MU6 729 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 ILKAPQ9H0C8 392 aaPredicted RBP16.71■□□□□ 0.27
DDR1-235ENST00000428153 ASF1BQ9NVP2 202 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 PAK5Q9P286 719 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 MAP10Q9P2G4 905 aa16.71■□□□□ 0.27
DDR1-235ENST00000428153 PRICKLE3O43900 615 aaPredicted RBP16.7■□□□□ 0.26
DDR1-235ENST00000428153 ITGAXP20702 1163 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 ALAS2P22557 587 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 NAA25Q14CX7 972 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 FAM214AQ32MH5 1076 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 PCID2Q5JVF3 399 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 TTLL10Q6ZVT0 673 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 TMEM139Q8IV31 216 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 VRK3Q8IV63 474 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 LMNTD1Q8N9Z9 388 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 PPHLN1Q8NEY8 458 aaKnown RBP16.7■□□□□ 0.26
DDR1-235ENST00000428153 PRR7Q8TB68 274 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 ATG4AQ8WYN0 398 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 RAD51AP1Q96B01 352 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 C19orf60Q96EN9 201 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 SPSB2Q99619 263 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
DDR1-235ENST00000428153 RAB6BQ9NRW1 208 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 CUTCQ9NTM9 273 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 CATSPERZQ9NTU4 200 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.7■□□□□ 0.26
DDR1-235ENST00000428153 SLC39A10Q9ULF5 831 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 ZNF148Q9UQR1 794 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 PCDHGA10Q9Y5H3 936 aa16.7■□□□□ 0.26
DDR1-235ENST00000428153 COPG1Q9Y678 874 aaKnown RBP16.7■□□□□ 0.26
DDR1-235ENST00000428153 LDLRP01130 860 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 IFNB1P01574 187 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 APRTP07741 180 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 RPS3P23396 243 aaKnown RBP eCLIP16.69■□□□□ 0.264e-7■■■□□ 18.1
DDR1-235ENST00000428153 CCNFP41002 786 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 GRIA1P42261 906 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 SEMA3AQ14563 771 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 SLC9A5Q14940 896 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 NR6A1Q15406 480 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 SF1Q15637 639 aaKnown RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 NKG7Q16617 165 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 PRAMEF13Q5VWM6 474 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 FIGLAQ6QHK4 219 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 C4orf22Q6V702 233 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 MAMDC2Q7Z304 686 aaPredicted RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 TAB3Q8N5C8 712 aaPredicted RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 CISD2Q8N5K1 135 aaKnown RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 TTC29Q8NA56 475 aaPredicted RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 GSDMBQ8TAX9 411 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 MAGEC3Q8TD91 643 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 WDR77Q9BQA1 342 aaPredicted RBP16.69■□□□□ 0.26
DDR1-235ENST00000428153 AGPAT4Q9NRZ5 378 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 SEMA3GQ9NS98 782 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 GNPTGQ9UJJ9 305 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 SLC5A6Q9Y289 635 aa16.69■□□□□ 0.26
DDR1-235ENST00000428153 DOCK10Q96BY6 2186 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 CREBBPQ92793 2442 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 ANKUB1A6NFN9 424 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 VSTM2BA6NLU5 285 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 KRT86O43790 486 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 RNF224P0DH78 156 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 ITGA3P26006 1051 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 CSE1LP55060 971 aaKnown RBP16.68■□□□□ 0.26
DDR1-235ENST00000428153 ELOAQ14241 798 aaKnown RBP16.68■□□□□ 0.26
DDR1-235ENST00000428153 AGAP7PQ5VUJ5 663 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 FCRL6Q6DN72 434 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 DRICH1Q6PGQ1 229 aaPredicted RBP16.68■□□□□ 0.26
DDR1-235ENST00000428153 SLC13A5Q86YT5 568 aaPredicted RBP16.68■□□□□ 0.26
DDR1-235ENST00000428153 CCDC89Q8N998 374 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 LKAAEAR1Q8TD35 194 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 INPP5DQ92835 1189 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 AGAP4Q96P64 663 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 IL22Q9GZX6 179 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 P2RY12Q9H244 342 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 SLC6A20Q9NP91 592 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 ERRFI1Q9UJM3 462 aaPredicted RBP16.68■□□□□ 0.26
DDR1-235ENST00000428153 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 FBXL4Q9UKA2 621 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 HS3ST3B1Q9Y662 390 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 CAPN6Q9Y6Q1 641 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 FAM169AQ9Y6X4 670 aa16.68■□□□□ 0.26
DDR1-235ENST00000428153 IQCF5A8MTL0 148 aa16.67■□□□□ 0.26
DDR1-235ENST00000428153 SOCS6O14544 535 aa16.67■□□□□ 0.26
DDR1-235ENST00000428153 CD3EAPO15446 510 aaKnown RBP16.67■□□□□ 0.26
DDR1-235ENST00000428153 C1orf105O95561 183 aa16.67■□□□□ 0.26
DDR1-235ENST00000428153 GRIA3P42263 894 aa16.67■□□□□ 0.26
DDR1-235ENST00000428153 CARSP49589 748 aaKnown RBP16.67■□□□□ 0.26
DDR1-235ENST00000428153 ARMC3Q5W041 872 aa16.67■□□□□ 0.26
DDR1-235ENST00000428153 B3GNTL1Q67FW5 361 aaPredicted RBP16.67■□□□□ 0.26
DDR1-235ENST00000428153 PTRHD1Q6GMV3 140 aaKnown RBP16.67■□□□□ 0.26
DDR1-235ENST00000428153 PRMT9Q6P2P2 845 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms