RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZNF548Q8NEK5 533 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 GAB3Q8WWW8 586 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 THRSPQ92748 146 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 RGMAQ96B86 450 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CERS2Q96G23 380 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 HIC2Q96JB3 615 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NELL2Q99435 816 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 OPA3Q9H6K4 179 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 TCF7L1Q9HCS4 588 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 Q9N2J8 555 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 C12orf4Q9NQ89 552 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ING4Q9UNL4 249 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZFR2Q9UPR6 939 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 hCG_1807616A0A1W2PRN6 198 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 LRCH4O75427 683 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 FOLR3P41439 243 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CCR10P46092 362 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PPIDQ08752 370 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 RFTN1Q14699 578 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 ALG10BQ5I7T1 473 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CATSPEREQ5SY80 951 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 GRHL2Q6ISB3 625 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 RHBDF2Q6PJF5 856 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NPNTQ6UXI9 565 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 LAPTM4BQ86VI4 370 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 PROKR2Q8NFJ6 384 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 KBTBD8Q8NFY9 601 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 AKAP1Q92667 903 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC4-206ENST00000427635 GPR174Q9BXC1 333 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 DEFB126Q9BYW3 111 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ACTL8Q9H568 366 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 GKN1Q9NS71 199 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CENPMQ9NSP4 180 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 KCNS2Q9ULS6 477 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MADDQ8WXG6 1647 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NCANO14594 1321 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SALL3Q9BXA9 1300 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 A0A0G2JMP0 313 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 E7EQ34 232 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 AP1G1O43747 822 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 LRIG2O94898 1065 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ITGA5P08648 1049 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ANXA4P09525 319 aaPredicted RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 SDHBP21912 280 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CDK10Q15131 360 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 FAM214AQ32MH5 1076 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 POTEHQ6S545 545 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MBOAT1Q6ZNC8 495 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZC3HC1Q86WB0 502 aaKnown RBP5.62□□□□□ -1.51
HERC4-206ENST00000427635 PHC2Q8IXK0 858 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF366Q8N895 744 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 ZNF321PQ8N8H1 164 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 OR4M2Q8NGB6 313 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 OR4K2Q8NGD2 314 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 TMCO6Q96DC7 493 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 KLHL5Q96PQ7 755 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 CREBZFQ9NS37 354 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 SLC7A11Q9UPY5 501 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 UBIAD1Q9Y5Z9 338 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 MST1RQ04912 1400 aa5.62□□□□□ -1.51
HERC4-206ENST00000427635 NWD1Q149M9 1564 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CLTCL1P53675 1640 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 FAM86B1E9PN63 330 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PRH1P02810 166 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 FAM86B2P0C5J1 330 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GOT1P17174 413 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 RPS21P63220 83 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 BNIP2Q12982 314 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GRIK2Q13002 908 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ABHD12BQ7Z5M8 362 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 DCP2Q8IU60 420 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZCCHC7Q8N3Z6 543 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 OR6Y1Q8NGX8 325 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 FNIP1Q8TF40 1166 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 KCTD13Q8WZ19 329 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CDCA3Q99618 268 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 THUMPD1Q9NXG2 353 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 PPP4R1LQ9P1A2 415 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 FAM198AQ9UFP1 575 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 A0A0G2JLL6 359 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 SH3PXD2BA1X283 911 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 OTOL1A6NHN0 477 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 B4GALT2O60909 372 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ACTL6BO94805 426 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CNOT4O95628 575 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 HOXD11P31277 338 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 GALNSP34059 522 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 WNT3AP56704 352 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 OR2B6P58173 313 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 NEDD8Q15843 81 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 LYSMD4Q5XG99 296 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TMEM198Q66K66 360 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TMEM53Q6P2H8 277 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PRRT2Q7Z6L0 340 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 SERPINA9Q86WD7 417 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZZZ3Q8IYH5 903 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ARL14Q8N4G2 192 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TMEM234Q8WY98 164 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 HLA-CQ95604 372 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms