RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 RAB42Q8N4Z0 105 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 OTUD6BQ8N6M0 293 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 PRELID2Q8N945 189 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 FDCSPQ8NFU4 85 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 DENND1AQ8TEH3 1009 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 RAD51AP1Q96B01 352 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 MFSD3Q96ES6 412 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 BIRC8Q96P09 236 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 TCF12Q99081 682 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 NUDT9Q9BW91 350 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 ENAMQ9NRM1 1142 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.24■□□□□ 0.67
CCDC107-206ENST00000426546 CIDEBQ9UHD4 219 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 TTC7AQ9ULT0 858 aaPredicted RBP19.24■□□□□ 0.67
CCDC107-206ENST00000426546 KLHL20Q9Y2M5 609 aa19.24■□□□□ 0.67
CCDC107-206ENST00000426546 NOTCH2Q04721 2471 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 TCRBV7S3A2A0A539 114 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 TTLL8A6PVC2 850 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 H3BMM5 538 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 PRICKLE3O43900 615 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 DPM1O60762 260 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 SORBS2O94875 1100 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 C1orf105O95561 183 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 IGHEP01854 428 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 GNLYP22749 145 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 ATP5DP30049 168 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 ARSFP54793 590 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 ADARP55265 1226 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 SARNPP82979 210 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 KCNJ11Q14654 390 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 SF1Q15637 639 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 NADK2Q4G0N4 442 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 ZC3H12BQ5HYM0 836 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 CTSL3PQ5NE16 218 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 KIAA0930Q6ICG6 404 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 MRPL14Q6P1L8 145 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 FIGLAQ6QHK4 219 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 TAX1BP1Q86VP1 789 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 MCATQ8IVS2 390 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 C2orf73Q8N5S3 287 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 LMNTD1Q8N9Z9 388 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 HMGCLL1Q8TB92 370 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 SKA2Q8WVK7 121 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 LPGAT1Q92604 370 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 FOPNLQ96NB1 174 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 SMAD5Q99717 465 aaKnown RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 PLEKHB1Q9UF11 243 aaPredicted RBP19.23■□□□□ 0.67
CCDC107-206ENST00000426546 NFS1Q9Y697 457 aa19.23■□□□□ 0.67
CCDC107-206ENST00000426546 PRRC2CQ9Y520 2896 aaKnown RBP19.22■□□□□ 0.67
CCDC107-206ENST00000426546 A0A1B0GX78 115 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 USP27XA6NNY8 438 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 TARM1B6A8C7 271 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 VPS4BO75351 444 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 ESR1P03372 595 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 OGNP20774 298 aaKnown RBP19.22■□□□□ 0.67
CCDC107-206ENST00000426546 GBX1Q14549 363 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 SLC9A5Q14940 896 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 FCRL6Q6DN72 434 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 CES3Q6UWW8 571 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 EFCAB3Q8N7B9 438 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 CLEC1AQ8NC01 280 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 GALNT11Q8NCW6 608 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 MAGEC3Q8TD91 643 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 ZUFSPQ96AP4 578 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 FKBP10Q96AY3 582 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 FER1L6-AS2Q96M78 137 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 VPS4AQ9UN37 437 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 KLK4Q9Y5K2 254 aa19.22■□□□□ 0.67
CCDC107-206ENST00000426546 UNC79Q9P2D8 2635 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 A6NL46 340 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 PEX12O00623 359 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 CNOT3O75175 753 aaKnown RBP19.21■□□□□ 0.67
CCDC107-206ENST00000426546 AGFG2O95081 481 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 PAMP19021 973 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 GPS1Q13098 491 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 TRIP13Q15645 432 aaPredicted RBP19.21■□□□□ 0.67
CCDC107-206ENST00000426546 TCTE1Q5JU00 501 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 FHL5Q5TD97 284 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 YOD1Q5VVQ6 348 aaPredicted RBP19.21■□□□□ 0.67
CCDC107-206ENST00000426546 CPT1CQ8TCG5 803 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 NACC2Q96BF6 587 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 PTERQ96BW5 349 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 ZNF285Q96NJ3 590 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 SPATA7Q9P0W8 599 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 C5AR2Q9P296 337 aa19.21■□□□□ 0.67
CCDC107-206ENST00000426546 RUVBL2Q9Y230 463 aaKnown RBP19.21■□□□□ 0.67
CCDC107-206ENST00000426546 RP1L1Q8IWN7 2480 aaPredicted RBP19.2■□□□□ 0.66
CCDC107-206ENST00000426546 SHANK1Q9Y566 2161 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 GOLGA8KD6RF30 607 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 GOLGA8TH3BQL2 631 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 DSCR3O14972 297 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 MATN4O95460 622 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 ONECUT2O95948 504 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 UMODP07911 640 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 PIM1P11309 404 aaPredicted RBP19.2■□□□□ 0.66
CCDC107-206ENST00000426546 ALAS2P22557 587 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 FMO4P31512 558 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 GRIA3P42263 894 aa19.2■□□□□ 0.66
CCDC107-206ENST00000426546 BDKRB1P46663 353 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms